| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_48176-2.3 | TOLL-LIKE RECEPTOR | Bpl_scaf_48176 | 265598 | 268147 | - |
| CDS | |||||
| Bpl_scaf_48176-2.3 | |||||
| Transcript |
| Bpl_scaf_48176-2.3 |
| Protein |
| Bpl_scaf_48176-2.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01582 | TIR | TIR domain | Family | Interproscan |
| PF13855 | LRR_8 | Leucine rich repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000157 | Domain | Toll/interleukin-1 receptor homology (TIR) domain | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR003591 | Repeat | Leucine-rich repeat, typical subtype | Interproscan |
| IPR017241 | Family | Toll-like receptor | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR035897 | Homologous_superfamily | Toll/interleukin-1 receptor homology (TIR) domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24365 | TOLL-LIKE RECEPTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002224 | Biological Process | toll-like receptor signaling pathway | Interproscan |
| GO:0004888 | Molecular Function | transmembrane signaling receptor activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005887 | Cellular Component | plasma membrane | Interproscan |
| GO:0006954 | Biological Process | inflammatory response | Interproscan |
| GO:0006955 | Biological Process | immune response | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0038023 | Molecular Function | signaling receptor activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10160 | TLR4, CD284; toll-like receptor 4 | - | NF-kappa B signaling pathway | ko04064 | PMID: 28812709 |
| HIF-1 signaling pathway | ko04066 | PMID: 28812709 | |||
| PI3K-Akt signaling pathway | ko04151 | PMID: 28812709 | |||
| Phagosome | ko04145 | PMID: 28812709 | |||
| Necroptosis | ko04217 | PMID: 28812709 | |||
| Toll-like receptor signaling pathway | ko04620 | PMID: 28812709 | |||
| NOD-like receptor signaling pathway | ko04621 | PMID: 28812709 | |||
| Proteoglycans in cancer | ko05205 | PMID: 28812709 | |||
| Rheumatoid arthritis | ko05323 | PMID: 28812709 | |||
| Inflammatiory bowel disease (IBD) | ko05321 | PMID: 28812709 | |||
| Pathogenic Escherichia coli infection | ko05130 | PMID: 28812709 | |||
| Salmonella infection | ko05132 | PMID: 28812709 | |||
| Pertussis | ko05133 | PMID: 28812709 | |||
| Legionellosis | ko05134 | PMID: 28812709 | |||
| Tuberculosis | ko05152 | PMID: 28812709 | |||
| Measles | ko05162 | PMID: 28812709 | |||
| Influenza A | ko05164 | PMID: 28812709 | |||
| Hepatitis B | ko05161 | PMID: 28812709 | |||
| Amoebiasis | ko05146 | PMID: 28812709 | |||
| Malaria | ko05144 | PMID: 28812709 | |||
| Toxoplasmosis | ko05145 | PMID: 28812709 | |||
| Leishmaniasis | ko05140 | PMID: 28812709 | |||
| Chagas disease (American trypanosomiasis) | ko05142 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_48176-2.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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