Gene detail

Detailed information of Bpl_scaf_47967-0.13 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_47967-0.13	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED	Bpl_scaf_47967	45047	128939	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_47967-0.13

ATGCTAAGTCGCTGTAAGGAGAATGCTGACGGGAAGGTGAATTATGTAGAATTCCTGGAGGCATTAAAGGTGGATGTTCGTCCAGGAGATCTGATTGGTCTGAGTCATCAAATTCACACTGGATGTGATGAACGTGAGGCCATACGTATGGGAGATCAAATGATCAGACAACACAAGAATGATAGAAGAGCACGGAGTAGAACAGGCATGATGACACCTGATGAAGTTATTATTAGATTGAAGGATCGTATGTCACAGCACCAAACACAGATACGCCAATCTTTTCTGTCTTTTGATAAAAGTGGAAAGGGAAAAGTCTTCAAAAGGCACTTTAGAGAGGTATTATCTAGTTATGGTATGGTATTATCTGATGAACATTTCCAAGAATTAACAAAAAAATTAGGATTTGAGAATGGTTCCCTGTCCTACACAGACTTCATTCAGGCGTTTGAAGATCCACGCTTCCACGGCCCTGGTGAGGAAATACAGAGAACAGGAAATCACCGTGTTAATCCTATACGAGGAGACGAGGAAGGAATGACTGCTGAACAGGTGGAGGCTAAACTACTAAGTAAATTAAGGGAAAACTTTGCTAATCTAAGAGCAGCCTTTTATAAATTTGACGATGATCATAACGGACTTATAAATAAAGAAAATTTCCGTAGAATATTGGACTCTTTTATGTGTATTATGTCAGACAATGAATTTGAAATTCTATGTAAAAAATTAGGAATAGGAAAACACACTAAAATATCATACGATGAATTCCTACAAAGATTTGAAGTGCGGGACACGGCCGAAGGACATAAGTGGCTCAATTCTGTTCATAGATGGAATGACACACAACCTACCCCTGAATTTACTGCTGAAGGTGCCTTTGAAGCTATGAGAGAAAAGGTTCATTTACAATGGAGAGATATAGCAAAGGCTTTTATGACAGTAGATTCCAGTGGTAAAGGTGTCGTTACTAAACGTGACCTCAGAGAATTATTGTATAGATTTGTTGTACCAATGGGACCACAGGAATTTAAAAAATTATGGAAAATGTATGATGATTCAGGTCGAGGATATATAACACATTCTGATTTCCTGTCCAAGATGGGAGTCTCGTCACTTTTTACTCCCTCTGATGATTTAGGAACCAGCAGTAAGATTATTGATGACAGTAAGAGAACATTACTAGATCATAATGAAACCCAACTTAAGAAACAAGAGAGGATAACTCTTCACCAAGCACAGAGAGTGGCGTTTATGACAGCTGAACAAGTTGAGAGACAATTAAGGGACAAGATACGTGATAAATATCAAGACTTCTATACTGCCTTTAGAAAGTATGATACAAAGAAGAAAGGCTCATTATCTGTTAATGAAATACAAAGAGTACTGAATGATCTGAACTTCTTTATGAATGACGAGGAGTTCTTCAGATTAATGGACTCAATTGGTTTGAGAACAAACAAAAGCCGGTTGAACTATGAAGAATTCTTACATGCTTTTGAGGATGGTAGAAAATCAAGTTACGGCCACCGAGCTACAAAGATAGATATCGTAGAACATCATGGTCTGTCTGCACAGGAAGCCGAGATGAGAATCAGAGAACATGTCGCTCAACAAACAGATGTGCTTGGAAGAGCTTTTGGATCATTTGACAAGACAGGGTCAAACCTAATATCATCAGAAGATTTCAGACGAGTCCTCGACATCTTTGTGTTTAAACTGACAAACCAACAATGGAAACATTTATTGTCAAAGTTACAGACGGCTGACAATAAGATCAATTATGCTCTGTTCCTAGATCAATACAACCAGACTGAGCAAGAGGACACAGAGAAATGGTTAGCAGCTTTACAAAAATCAATCCGAGACCAGAATTCATCAGCGTTGGCGTCAGATGATATCCAGGATCGTATTCGTGAGGCTGTACAGGGACATTTTTACATTCTCACACAAGCTTTTGCCGACGTAGATTTTGCTGGCATAGGAGCTGTAACTAAAGACGATTTCAAAACAATTCTCACCAAAAATGTCATGAGACCAACAGATGAACAATTTGACACACTTTGGGCCAGTTTACCCGTCAATGATTTTGGCAATCTAGATTACAAAGAATTTTTGAGGAGATACTCTTCACAGAGAAATGATCTCAAACTGAACTCACAGAGACCTGTATCAACAATGCCTGGTGTTCGTGCTCCATCACGAGCAATGAGTCGATCAATGACACAGTTAGATTTCGGTCGTTCAGGTAGTAGAATGCAGATGTCTCGTGCTCATTCTCGTTTGGCCACACCTTTAATTAATGCAGAATCAGTGGAAAATAGATTGAAAAATACAGTATTTAGGAACTGGAAAGATATACAGAGACAATGTAGAAACCAGGACAGAGAAAACACTGGAACAATTACAGTTGAACAGCTACGAGACATTCTTATAGCCAATGGTGTTGACATGCCAGAAGAAGAATTTTATGATTTGATGACGAAGTATGACTTGAAAGAAAATGGAACGTTTTCATATGTTGAGTTCTTACGTCATTTTATACTGTCACTGAAACCTAAAGAAGAGTCAAATCTGATGACAAGACGTCGTTTACCTCCAACAAGGGCTTCGATGTCTGCTGGTCATACGAGTGATAACTTCTTTGATGCAATGGTCCGTGTAAGAGACTGTGTATTAGATAACTGGAAAGAGATGCGAAGAGTTTTCCGTAATACAGACAACCACAATACTGGAGTTGTTGACTCATTACAATTTCGTCAAATTCTACGACAGTTTAATGTCAATCTGTCGGAGGAAGAATTCTTTCATCTTTTGTCGTATTATGATAAGAATTTGGATGGTAATATAAGTTATAATGACTTTATTAGAGCCTATTTACAGCACTCTTGA

Transcript

Bpl_scaf_47967-0.13

ATTTAGTAATATTATTGCAAGTTTGTGAGTTACAGATCAATGAATGTTTACGGAGATCACATACTTATTTTGGCAAAAGTAACATCATGGCTGCCTCACGTTTTGGTATATTGGTGAGACAATTTAGCTCTTCAGCTGTCAGAAATGGACTTATTCAGCCACCTATTCAAGTTTTTGGGATAGAAGGAAGATATGCCACAGCATTTTATTCTGCTGCTGTGAAAGAAAAAAAATTAGATGCTGTTGAAGCAGAATTAGTGTCACTAAAGAATCTTATAAATAAAGATAAACCTTTTGCCGAATTTCTCCTGAATCCAACACTTAGCCGAACAGACAAACAAGATGCCGTGGCTGCTGTTGCTAAGAAACAGAAATGCTCACCACTAACAACAAATTTATTTGCTACATTAGCTGAGAATGGTAGGCTCAACAAATTAGATGGTGTACTGGATGCTTTCCAGAAAATCATGAGTGCCCACAGAGGAGAAGTGACATGTAGTGTTACTACAGCTAAGGTAAGAACACAGAAGTCACATGCAGTGTTACTACTGCTAAGGATGACATCAGCAGTTGCTATACCAGTGCTTTTGCCAGAGTCACAGGGTGCACCTATGTCATCTAGACCATCTGCTAGGAACAGCAATAGACTTAAATCCAGTCGAGTAGGTCGCTCATCTTCTCTCGGTTCTGCAGGTTCATCTATACAATCTCCCAATGCCAGTCTATCTAGTATTGAGATAGAGGCATTAATGAGAGAGAAGGTGAGGACCAAACACCAAGACATAATGCAGGCCTTTTTGACCTATGATATTGAAAACAATGGGGGTGTAACAAAAGGTGAATTTCGAAGAGTGTTAGAATCCTTTTGTTTCCCCCTGACCACCGAGCAGTTTGAGGCGGTCGTGGCAAAGGTAGAGAAGAACCCTAACAATACAATGAGATACGGTGATTTCATGGACAAATTTTACGGTCAACATATTCCTTCAGCACAGAGTAGAATTGGTGGTTTTCAGAAGATGGGTTTACCTCCTCAATCAGCAAGAGAAATGAATGTTGATATGATAGAAAAAATGCTAAGAGATAAGATAAGTGGGAATCTGAAACCTGTCGTAAAAGCTCTACAGTTGTTTGACTATAACAGGGATGGAAAAATACAAAGACATGAGTTAAGACGTGTCATAGAAAATTACTGCTTCAAATTGAATGACCAACAATTTGACAAATTATGGCAGAGATATGACTTCCATCACACTGGTTTGGTAAATTACAAGGAGTTCCTACATAGACTAGGTGTAGCAGTCTCTAATCAGTTCAAACCATTACCAGAAAGTGCCAAAGGAGCATTAATATGGCAACAACAAGGATCACAACAATCTGGTAAATTCTTTAAACAGAGACGAGAGGATGAAGCTTCCTTACAGAAGATGAACTTTAATCAGATTGAACTGGAATTCAGACACAGGATGAGAATGAACTACCTCAATTTAAAGAAGATATTTTTATCGTTTGATCGACATTTAGACGGATTCATCAATTTAGAAGATTTAAAATCAATACTTATACAATTTACGATACCAATGTCTGATCAACTGTTTACACAGCTAATGGAGAGATGTGGTGTGAAAGGAAGTACTAAGGTATCATGGGAAGCTTTTCTAGATAAGTTTCAGGATGCACAAGCTAGTGGAAATGGACAGACAATTCCTATTAAACCCGCCCACAAATTTTTCCCTATAAGAGAAGCTATGAAGACAGTAGAAGTTGAAGATATATGGAAACTTCTATATAAACATGTACAGAATCATTATCCCTCATTAAAACAAGCTTTTCTAGAGATTGATGCTACTCGTAAAGGTCGGGTAACAAGGAAGGAACTAAGAAATGTTGTAGAGAAATTTACATTCCGTCTAGAAGATGAACAGTTCAAACAGCTGATGTTAAAATTAGATCCATTTCATACCAATAATATTTCATACCATCAGTTCCTGGAATTGTTTGAAGAGAAAGATGATTTAGTGGAAGGACACAAGTGGCTGAGATCTAATCATAAATTTAATGAGGTTGCAAAACCAGCAGTAATGGCATGGGAAACAATTGAAGAAATATTACGAGAAAAAATTACAGAAAATTGGAAGAATGTTAGTGGTGCCATAATGGACCACGATCATAGAAGAGAAGGAAGAATTCCTGCTTCTAAAATGAAGAAATATGCTAAGTCGCTGTAAGGAGAATGCTGACGGGAAGGTGAATTATGTAGAATTCCTGGAGGCATTAAAGGTGGATGTTCGTCCAGGAGATCTGATTGGTCTGAGTCATCAAATTCACACTGGATGTGATGAACGTGAGGCCATACGTATGGGAGATCAAATGATCAGACAACACAAGAATGATAGAAGAGCACGGAGTAGAACAGGCATGATGACACCTGATGAAGTTATTATTAGATTGAAGGATCGTATGTCACAGCACCAAACACAGATACGCCAATCTTTTCTGTCTTTTGATAAAAGTGGAAAGGGAAAAGTCTTCAAAAGGCACTTTAGAGAGGTATTATCTAGTTATGGTATGGTATTATCTGATGAACATTTCCAAGAATTAACAAAAAAATTAGGATTTGAGAATGGTTCCCTGTCCTACACAGACTTCATTCAGGCGTTTGAAGATCCACGCTTCCACGGCCCTGGTGAGGAAATACAGAGAACAGGAAATCACCGTGTTAATCCTATACGAGGAGACGAGGAAGGAATGACTGCTGAACAGGTGGAGGCTAAACTACTAAGTAAATTAAGGGAAAACTTTGCTAATCTAAGAGCAGCCTTTTATAAATTTGACGATGATCATAACGGACTTATAAATAAAGAAAATTTCCGTAGAATATTGGACTCTTTTATGTGTATTATGTCAGACAATGAATTTGAAATTCTATGTAAAAAATTAGGAATAGGAAAACACACTAAAATATCATACGATGAATTCCTACAAAGATTTGAAGTGCGGGACACGGCCGAAGGACATAAGTGGCTCAATTCTGTTCATAGATGGAATGACACACAACCTACCCCTGAATTTACTGCTGAAGGTGCCTTTGAAGCTATGAGAGAAAAGGTTCATTTACAATGGAGAGATATAGCAAAGGCTTTTATGACAGTAGATTCCAGTGGTAAAGGTGTCGTTACTAAACGTGACCTCAGAGAATTATTGTATAGATTTGTTGTACCAATGGGACCACAGGAATTTAAAAAATTATGGAAAATGTATGATGATTCAGGTCGAGGATATATAACACATTCTGATTTCCTGTCCAAGATGGGAGTCTCGTCACTTTTTACTCCCTCTGATGATTTAGGAACCAGCAGTAAGATTATTGATGACAGTAAGAGAACATTACTAGATCATAATGAAACCCAACTTAAGAAACAAGAGAGGATAACTCTTCACCAAGCACAGAGAGTGGCGTTTATGACAGCTGAACAAGTTGAGAGACAATTAAGGGACAAGATACGTGATAAATATCAAGACTTCTATACTGCCTTTAGAAAGTATGATACAAAGAAGAAAGGCTCATTATCTGTTAATGAAATACAAAGAGTACTGAATGATCTGAACTTCTTTATGAATGACGAGGAGTTCTTCAGATTAATGGACTCAATTGGTTTGAGAACAAACAAAAGCCGGTTGAACTATGAAGAATTCTTACATGCTTTTGAGGATGGTAGAAAATCAAGTTACGGCCACCGAGCTACAAAGATAGATATCGTAGAACATCATGGTCTGTCTGCACAGGAAGCCGAGATGAGAATCAGAGAACATGTCGCTCAACAAACAGATGTGCTTGGAAGAGCTTTTGGATCATTTGACAAGACAGGGTCAAACCTAATATCATCAGAAGATTTCAGACGAGTCCTCGACATCTTTGTGTTTAAACTGACAAACCAACAATGGAAACATTTATTGTCAAAGTTACAGACGGCTGACAATAAGATCAATTATGCTCTGTTCCTAGATCAATACAACCAGACTGAGCAAGAGGACACAGAGAAATGGTTAGCAGCTTTACAAAAATCAATCCGAGACCAGAATTCATCAGCGTTGGCGTCAGATGATATCCAGGATCGTATTCGTGAGGCTGTACAGGGACATTTTTACATTCTCACACAAGCTTTTGCCGACGTAGATTTTGCTGGCATAGGAGCTGTAACTAAAGACGATTTCAAAACAATTCTCACCAAAAATGTCATGAGACCAACAGATGAACAATTTGACACACTTTGGGCCAGTTTACCCGTCAATGATTTTGGCAATCTAGATTACAAAGAATTTTTGAGGAGATACTCTTCACAGAGAAATGATCTCAAACTGAACTCACAGAGACCTGTATCAACAATGCCTGGTGTTCGTGCTCCATCACGAGCAATGAGTCGATCAATGACACAGTTAGATTTCGGTCGTTCAGGTAGTAGAATGCAGATGTCTCGTGCTCATTCTCGTTTGGCCACACCTTTAATTAATGCAGAATCAGTGGAAAATAGATTGAAAAATACAGTATTTAGGAACTGGAAAGATATACAGAGACAATGTAGAAACCAGGACAGAGAAAACACTGGAACAATTACAGTTGAACAGCTACGAGACATTCTTATAGCCAATGGTGTTGACATGCCAGAAGAAGAATTTTATGATTTGATGACGAAGTATGACTTGAAAGAAAATGGAACGTTTTCATATGTTGAGTTCTTACGTCATTTTATACTGTCACTGAAACCTAAAGAAGAGTCAAATCTGATGACAAGACGTCGTTTACCTCCAACAAGGGCTTCGATGTCTGCTGGTCATACGAGTGATAACTTCTTTGATGCAATGGTCCGTGTAAGAGACTGTGTATTAGATAACTGGAAAGAGATGCGAAGAGTTTTCCGTAATACAGACAACCACAATACTGGAGTTGTTGACTCATTACAATTTCGTCAAATTCTACGACAGTTTAATGTCAATCTGTCGGAGGAAGAATTCTTTCATCTTTTGTCGTATTATGATAAGAATTTGGATGGTAATATAAGTTATAATGACTTTATTAGAGCCTATTTACAGCACTCTTGAGGCGGAAAAAATGTTTCAGCCAATCTGTGTACGGTTTGTTAAATTCTTTTAGGAAACATTTATGCAAATTTTTTTTTCTTATGAAATATTATTTTTTACATGTAAAATGTAATATTTATGAAAAAGTACAATTTTATAATAGTACACATGACAACAGTAGAACGATTTTTTTACATTATTACCTAGCTTTTCTTTTTGTCATTAATTTTGGGGTAGAAACCGGTTAACTCTGTGTTTTATATATTGTTGAAACAATTTCAAGGAATTTGAGGGAAAAAAAAACCTGTTGCCAACATTTTGTATTTAATGATCGTCGAAGTCTAGTAAATAGGTTGAAACTTAAATGAGGACCTTGAAGTCAGAAATAGGCTGTGTTTTAATTGATAAAAATAAGTCGAACATTTGCTAGAAATTATGTAAGTGATATATTAGTGCTGGTAAAATAAGTTTGGTTGAACCAATATTTCTACAAAAATAAATCCAAGGTTAAACAATTTCCAAGTTTAAAGATCCTTTAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08976	EF-hand_11	EF-hand domain	Domain	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR015070	Domain	DJBP, EF-hand domain	Interproscan
IPR052603	Family	EF-hand calcium-binding domain-containing protein 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20875	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_47967-0.13 global RNA-seq network