| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_47616-0.0 | SYNAPTONEMAL COMPLEX PROTEIN 1 | Bpl_scaf_47616 | 30601 | 81427 | - |
| CDS | |||||
| Bpl_scaf_47616-0.0 | |||||
| Transcript |
| Bpl_scaf_47616-0.0 |
| Protein |
| Bpl_scaf_47616-0.0 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05483 | SCP-1 | Synaptonemal complex protein 1 (SCP-1) | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008827 | Family | Synaptonemal complex protein 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46918 | SYNAPTONEMAL COMPLEX PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000711 | Biological Process | meiotic DNA repair synthesis | Interproscan |
| GO:0000795 | Cellular Component | synaptonemal complex | Interproscan |
| GO:0000801 | Cellular Component | central element | Interproscan |
| GO:0000802 | Cellular Component | transverse filament | Interproscan |
| GO:0001673 | Cellular Component | male germ cell nucleus | Interproscan |
| GO:0003690 | Molecular Function | double-stranded DNA binding | Interproscan |
| GO:0007130 | Biological Process | synaptonemal complex assembly | Interproscan |
| GO:0051026 | Biological Process | chiasma assembly | Interproscan |
| GO:0051878 | Biological Process | lateral element assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19533 | SYCP1; synaptonemal complex protein 1 | - | Chromosome and associated proteins | ko03036 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_47616-0.0 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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