Gene detail

Detailed information of Bpl_scaf_47568-1.2 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_47568-1.2	UNCHARACTERIZED	Bpl_scaf_47568	84969	103513	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_47568-1.2

ATGAGAAATGAGTTGACACAAAAATTGAACAAACCCATAGGAAATTTACAAGTTTTGGAAACTTTACTTGAAATGTGGTATAATCAACAAGAGGAGAGTAGTGCTTCAAATGAACAAACTTTGCCAGAATCACCAATGCCAAGTACATATATCAAAGCTGGAAAGAAAGATGTCAACCAAACAATATTTATGTGTGCTGAAGATTCTCTCAAACGATATACAGAGCTTATTGATGCAAGACATGGTTGGAGGAAAAACGCGAAAGATTCCAGTATTGTTGCGATTGGAGAAAAAACCCACAAAGTCCTGTCATGTCAGCATGTAACTAAAGGTGATGATGTTGTATCACAAAGACATGAACGCATAGGTACGGACAGGATTTATAAACACTTGGATGAAAAGGGGGTGGCTGTTGGTGTCCACTGTCATGACAGAAACTTGTCAATCAATAAATATGTACGTGAAGAAACTGATGCTATAAATCAGAACGATACTTGGCACTGTGTTAAATCGGTGAAAACGGCTCTTAAAAAAGTTGCCTCAGGAACAGCTTCTTCTGAGAGAAAGACATGGTCGTTCCAACTTAGTGACAAAGTTGAGCCAGTTTCAACGCATATTCACTGGGCCATAAGAAATTGTAATGGTGATGCGGAAAAGTTAAAATCGTCACTTTTGAATATAGTTGATCATTATAAAAACATTCACACAGCATGTGATCCTTCATCTAGATGCAAAAATGATAAAAACTATGAACCATCAAGGATTGTTTTGACCGATCCCGTGGCAGAAAACCTTCTTGTGAAGGTTATATTGAATTCAAGCATATTCAGATATCCACAGGATTATATTCTTGGAAGAGACACATTTTATGTTGAAAGTTTCAATAACGTTATGAACATCTATCATGACAAGCGCATTGCATTTGGAGACATGCAGTCAGAGTATGGACTACAATATAAGAAAAGTCACCTTGTAAGAAATATTCCAGAGTATTATAACCATGTGGCTTACCGAACACATCGTAGAGAATTAGAACATGCACACACGCCGTTGTCGTGGGACTTTGAAAGTGAAACCCAAACAAATTCTGATGAAGACGTCAGTGATCTTCCACTTCAAAAGTTAAAAATAAGGGAGGAGGAATGTGAGGATGAACTAAAAAACGATGGAAACGATCCTGAATCTGATCATGAGGATAACCTGATCCAACAAGCAAAAGATAAACTAAAAAATTATGACAGTAAAGACAATCAAAATATAGACGAAGATAAAAAATATGTCAAAACTGTAGAAGATGATTTAAAATTAAAGGGAGATAAGAAAGACGGTGTACAATCTAAGGGAGATAAGACAGATGATTTACAATCTAAGGGAGGTACATTTAAGAAAGATGATTTACAATCCAAGGGTGCTGGAAAAGAATGTTGTGAAAAAAATGATCTTGTATTGGATCTGAAAGACAACAAAAATAAAGGAAGGAAGTTGAGACCAAAATTATCAGACAGACCAAAGTCTTCACCTATTTATAGACCACCATTTATGGCTTATGGTTGTGGAGACAGAGAGCGTGAAACTGGAGTCAAAAGATCATTTAACATTCGTGCTTCGGCTGATGTCTATCCTGCTGCTATGAAAGCTTTACTAGATTTAAACGAAAAACAGAAAAGACGAGAAAAAGCCAGGAGATGTTTATCAGCAAGAGAAAGAAAGAGGAAAGCCTTAGTACAGGAAAAAGCTGCTAAAGAAGTGGCTGGGTGGCAGTCGGAGTATCGCAGGATGTACCCACAATACAAAACAGATGAATATGCCAGATGTGCAGCACGTATACAGGACAAACCTCATATACACATGACAACATCAATGACCAATCACATTCCAGATACACATGACAACATCAATGACCAATCACATTCCAGATTGACAACACGAATGAACAATCAAAATCTAGATAGACAGACAACACCACTGACCAATCACAATCCACTTGGACAGGACAATGCCAAAGACCACTCACAATTCTGA

Transcript

Bpl_scaf_47568-1.2

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15748	CCSAP	Centriole, cilia and spindle-associated	Family	Interproscan
PF20700	Mutator	Mutator-like transposase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029774	Family	Centriole, cilia and spindle-associated protein	Interproscan
IPR049012	Domain	Mutator-like transposase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31022	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005814	Cellular Component	centriole	Interproscan
GO:0005819	Cellular Component	spindle	Interproscan
GO:0005856	Cellular Component	cytoskeleton	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0035869	Cellular Component	ciliary transition zone	Interproscan
GO:0036064	Cellular Component	ciliary basal body	Interproscan
GO:1901673	Biological Process	regulation of mitotic spindle assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16454	CCSAP; centriole, cilia and spindle-associated protein	-	Chromosome and associated proteins	ko03036	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_47568-1.2 global RNA-seq network