| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_47429-6.13 | NUCLEOPORIN NUP84-RELATED | Bpl_scaf_47429 | 661999 | 678861 | + |
| CDS | |||||
| Bpl_scaf_47429-6.13 | |||||
| Transcript |
| Bpl_scaf_47429-6.13 |
| Protein |
| Bpl_scaf_47429-6.13 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10168 | Nup88 | Nuclear pore component | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019321 | Family | Nucleoporin Nup88 | Interproscan |
| IPR037700 | Family | Nucleoporin NUP88/NUP82 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13257 | NUCLEOPORIN NUP84-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000055 | Biological Process | ribosomal large subunit export from nucleus | Interproscan |
| GO:0000056 | Biological Process | ribosomal small subunit export from nucleus | Interproscan |
| GO:0005643 | Cellular Component | nuclear pore | Interproscan |
| GO:0006406 | Biological Process | mRNA export from nucleus | Interproscan |
| GO:0006606 | Biological Process | protein import into nucleus | Interproscan |
| GO:0006913 | Biological Process | nucleocytoplasmic transport | Interproscan |
| GO:0017056 | Molecular Function | structural constituent of nuclear pore | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14318 | NUP88; nuclear pore complex protein Nup88 | - | RNA transport | ko03013 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_47429-6.13 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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