Detailed information of Bpl_scaf_47429-4.7 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_47429-4.7E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATEDBpl_scaf_47429445984453777-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR045103FamilyE3 ubiquitin-protein ligase RNF5/RNF185-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12313E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0044390Molecular Functionubiquitin-like protein conjugating enzyme bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071712Biological Processobsolete ER-associated misfolded protein catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10666RNF5; E3 ubiquitin-protein ligase RNF5EC:2.3.2.27
Protein processing in endoplasmic reticulum ko04141PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_47429-4.7 global RNA-seq network
TOP