| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_47428-2.13 | 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT | Bpl_scaf_47428 | 184752 | 214188 | - |
| CDS | |||||
| Bpl_scaf_47428-2.13 | |||||
| Transcript |
| Bpl_scaf_47428-2.13 |
| Protein |
| Bpl_scaf_47428-2.13 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04739 | AMPKBI | 5'-AMP-activated protein kinase beta subunit, interaction domain | Family | Interproscan |
| PF16561 | AMPK1_CBM | Glycogen recognition site of AMP-activated protein kinase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006828 | Domain | Association with the SNF1 complex (ASC) domain | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR032640 | Domain | AMP-activated protein kinase, glycogen-binding domain | Interproscan |
| IPR037256 | Homologous_superfamily | ASC domain superfamily | Interproscan |
| IPR050827 | Family | CRP1/MDG1 DNA-binding & kinase subunit | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10343 | 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
| GO:0019901 | Molecular Function | protein kinase binding | Interproscan |
| GO:0031588 | Cellular Component | nucleotide-activated protein kinase complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07199 | PRKAB; 5'-AMP-activated protein kinase, regulatory beta subunit | - | Apelin signaling pathway | ko04371 | PMID: 28812709 |
| FoxO signaling pathway | ko04068 | PMID: 28812709 | |||
| AMPK signaling pathway | ko04152 | PMID: 28812709 | |||
| Tight junction | ko04530 | PMID: 28812709 | |||
| Insulin signaling pathway | ko04910 | PMID: 28812709 | |||
| Glucagon signaling pathway | ko04922 | PMID: 28812709 | |||
| Adipocytokine signaling pathway | ko04920 | PMID: 28812709 | |||
| Oxytocin signaling pathway | ko04921 | PMID: 28812709 | |||
| Longevity regulating pathway - mammal | ko04211 | PMID: 28812709 | |||
| Longevity regulating pathway - multiple species | ko04213 | PMID: 28812709 | |||
| Circadian rhythm | ko04710 | PMID: 28812709 | |||
| Hypertrophic cardiomyopathy (HCM) | ko05410 | PMID: 28812709 | |||
| Non-alcoholic fatty liver disease (NAFLD) | ko04932 | PMID: 28812709 | |||
| Insulin resistance | ko04931 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_47428-2.13 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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