| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_47325-0.3 | RIBOSOME BIOGENESIS PROTEIN BRIX | Bpl_scaf_47325 | 24705 | 43219 | + |
| CDS | |||||
| Bpl_scaf_47325-0.3 | |||||
| Transcript |
| Bpl_scaf_47325-0.3 |
| Protein |
| Bpl_scaf_47325-0.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04427 | Brix | Brix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007109 | Domain | Brix domain | Interproscan |
| IPR026532 | Family | Ribosome biogenesis protein BRX1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13634 | RIBOSOME BIOGENESIS PROTEIN BRIX | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000027 | Biological Process | ribosomal large subunit assembly | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0019843 | Molecular Function | rRNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14820 | BRX1, BRIX1; ribosome biogenesis protein BRX1 | - | Ribosome biogenesis | ko03009 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_47325-0.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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