Gene detail

Detailed information of Bpl_scaf_46480-0.47 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_46480-0.47	F-BOX ONLY PROTEIN 33	Bpl_scaf_46480	134857	140260	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_46480-0.47

CAAAATGGCAAGCTTTGATTTACTTCCTGATAACCTTATTTTAGATATTTTAAATTACTTACCTGTTAAAGAATTGTGTTTAAGCGGGAGAGTTTGTAGAAGATGGAGAAGAATCGCACGAGACAATTCACTGTGGAGACATGTGGATTTATCACCTTATCGATTAGATCTCAAGAAAATGTGGAAAGTCATCAGATCTCATTTCTCAGAATGTCTTCATACTTTAAAATTAAGAGGAGGGTTAGATAGGAAGAATAGAGATAAAAACACTTTGTCCGATGCTATGCTGAAAGACTTGAATGAGCGGTGCCCAAACATCAAGCACATTTCATTATATCTGTGCAAACTACATGACCTTGAGATGAATTTACCTGCCAGCTTGTCCACTATAGAATTAAACCATTGTTCCTGGAAACCCAGATGGTTTGAGGATGTACACACCATTATACCAAATCTACACACGTTATTTATGGAACACACGACAAGGATAGATAACCATGACCTGGACGATATTTCTAAAATAACAAGTTTAAATGTTCTTAATTTAAATGGATGTTACAGAATAAATGAAAAGGGATTGGAAAAGATAACAACAAAACTTACCAATCTACATACTTTAGAAATAGCTTATTGTGGGTGTACCGATTTAATTTTACATCATATTACACGTCATATGTCTAAATTGGAAGTTTTAAATCTACGACATAGTGTTCAAATAACTGATTCTGGGGTTTCCATCCTGGCATCAGGACTTCACAATCTAAAACATATAAACATCAATTTATGTACATCGCTGACACCTAGCAGCGTAGAATGTTTACAAGCTATGAAAACATTGAAATCATTAGTATGTGATCCGTCTCAGATTACTTTGAAGTTGGAAAAGTTATTAGAAGTCGGTGGATGTGATGTTACTGTATTAAAGGAGAGTGTTGTTCAAGAACCTGAATAATATGTTTACATAGGGATCACATTGTATCACACGTCAATGTGTCTGTGCCATATTTTTACCATTTACTCCTTTTTATAAATAACTTCAGCTTTGTCCAATTAAATCTCAATGAGGATAGGTTGGTTATTGGTTGGTTTTATGGTGTTTAACACCACTTTCAACAATATTTCAGTTATATCGTGCCAGTCAGTTTTATTGATGGAGGAAACTGGAGAAAACCAGACTTGTCGCAAGTCACTGACAAACTTTATCACATACTGTTTTATCGAGTACACCTCGCCATGAATGGGGTTCGAACTCACTACTTTAGTGGTGATAGGCACTGATTGCACATGTAGTTGTAAATCCAACTACCATACAATCATGACCATGACGGCCCCTCAATGAGGATAGGAAGATAATGAAGAACTATCAATCTGTTTTGATTAAGCATGGTTAAGTGGTCATCAGTGTTGTCTTTAGTGTATGTTTTTAAGTATGGCTCCACGTAAGGATCATGCAAAATCAAGAAAAAGTGATTTACCTTATGTCACCAATTCTCTCAATATTTTGCTATATGACACATTTTGAGTACAAATAAATGTATATTCAAGGAGATGTTTGTTGTAGTGTTTTAAGAATGTGTTCTTTGCCAATACACTAACTTCTAACAAAATCTTCTTTGGGATCTTGTCATGTAATTTTTCATTCATCTTTAACCATCCAATAAATATGCAAGACAATTACCTATATTAATCAATCGGTCAAATCCAAGATGGCCACCATCATAGAACAAGCTGTACATGGATAGTCATTAGATGATCACTTACAAAGTTTTCACATTTTGTATTGATCGAAAATCCAAGTTGGCCAACAAAGCATGACATTGTTTAACTATGGGAATATGAATAAAAAGTGTTTTCACAAAAATTACAAAAATTACACTCAACAGTGCATGAATAACCAATGAACATTACAGGCTAAGGCTAGGTTCTAGTTTTATTTGATTTGTTGTTTAACTGTGATATGATAAAGCAAGAAATATAATAATAATTAATTTAGATAACTGATATGATAAAACAAGAAATATAATAATATTTAATTTTGATAGAGAATTATTTTTAGATGTGTGTATTTCTTAACAAACTATATATACAATGACAGTCAATGA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001810	Domain	F-box domain	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20933	F-BOX ONLY PROTEIN 33	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0031398	Biological Process	positive regulation of protein ubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10278	FBXL12; F-box and leucine-rich repeat protein 12	-	Ubiquitin system	ko04121	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_46480-0.47 global RNA-seq network