Detailed information of Bpl_scaf_46135-0.5 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_46135-0.5LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIALBpl_scaf_461352195340137+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF17177PPR_longPentacotripeptide-repeat region of PRORPRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR002885RepeatPentatricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR033443DomainPentacotripeptide-repeat region of PRORPInterproscan
IPR033490FamilyLeucine-rich PPR motif-containing proteinInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46669LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIALInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0070129Biological Processregulation of mitochondrial translationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17964LRPPRC; leucine-rich PPR motif-containing protein, mitochondrial-Mitochondrial biogenesisko03029PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_46135-0.5 global RNA-seq network
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