Detailed information of Bpl_scaf_46063-1.1 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_46063-1.1TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNITBpl_scaf_46063114377115240-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02186TFIIE_betaTFIIE beta subunit core domainDomainInterproscan
PF18121TFA2_Winged_2TFA2 Winged helix domain 2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003166DomainTranscription factor TFIIE beta subunit, DNA-binding domainInterproscan
IPR016656FamilyTranscription initiation factor TFIIE, beta subunitInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR040501DomainTFA2, Winged helix domain 2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12716TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001097Molecular FunctionTFIIH-class transcription factor complex bindingInterproscan
GO:0005673Cellular Componenttranscription factor TFIIE complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03137TFIIE2, GTF2E2, TFA2; transcription initiation factor TFIIE subunit beta-Basal transcription factors ko03022PMID: 28812709
Viral carcinogenesis ko05203PMID: 28812709
Epstein-Barr virus infection ko05169PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_46063-1.1 global RNA-seq network
TOP