| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_46033-3.11 | CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE | Bpl_scaf_46033 | 253877 | 291613 | + |
| CDS | |||||
| Bpl_scaf_46033-3.11 | |||||
| Transcript |
| Bpl_scaf_46033-3.11 |
| Protein |
| Bpl_scaf_46033-3.11 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00289 | Biotin_carb_N | Biotin carboxylase, N-terminal domain | Domain | Interproscan |
| PF00364 | Biotin_lipoyl | Biotin-requiring enzyme | Domain | Interproscan |
| PF02785 | Biotin_carb_C | Biotin carboxylase C-terminal domain | Domain | Interproscan |
| PF02786 | CPSase_L_D2 | Carbamoyl-phosphate synthase L chain, ATP binding domain | Domain | Interproscan |
| PF18140 | PCC_BT | Propionyl-coenzyme A carboxylase BT domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000089 | Domain | Biotin/lipoyl attachment | Interproscan |
| IPR001882 | Binding_site | Biotin-binding site | Interproscan |
| IPR005479 | Domain | Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain | Interproscan |
| IPR005481 | Domain | Biotin carboxylase-like, N-terminal domain | Interproscan |
| IPR005482 | Domain | Biotin carboxylase, C-terminal | Interproscan |
| IPR011053 | Homologous_superfamily | Single hybrid motif | Interproscan |
| IPR011054 | Homologous_superfamily | Rudiment single hybrid motif | Interproscan |
| IPR011761 | Domain | ATP-grasp fold | Interproscan |
| IPR011764 | Domain | Biotin carboxylation domain | Interproscan |
| IPR013815 | Homologous_superfamily | ATP-grasp fold, subdomain 1 | Interproscan |
| IPR016185 | Homologous_superfamily | Pre-ATP-grasp domain superfamily | Interproscan |
| IPR041265 | Domain | Propionyl-coenzyme A carboxylase, BT domain | Interproscan |
| IPR050856 | Family | Biotin-dependent Carboxylase Complex | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18866 | CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004658 | Molecular Function | propionyl-CoA carboxylase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01965 | PCCA, pccA; propionyl-CoA carboxylase alpha chain | EC:6.4.1.3 | Carbon metabolism | ko01200 | PMID: 28812709 |
| Glyoxylate and dicarboxylate metabolism | ko00630 | PMID: 28812709 | |||
| Propanoate metabolism | ko00640 | PMID: 28812709 | |||
| Valine, leucine and isoleucine degradation | ko00280 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_46033-3.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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