| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_45868-0.18 | CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1 | Bpl_scaf_45868 | 67735 | 80030 | + |
| CDS | |||||
| Bpl_scaf_45868-0.18 | |||||
| Transcript |
| Bpl_scaf_45868-0.18 |
| Protein |
| Bpl_scaf_45868-0.18 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06391 | MAT1 | CDK-activating kinase assembly factor MAT1 | Family | Interproscan |
| PF17121 | zf-C3HC4_5 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR004575 | Family | Cdk-activating kinase assembly factor MAT1/Tfb3 | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR015877 | Domain | Cdk-activating kinase assembly factor MAT1, centre | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12683 | CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000079 | Biological Process | regulation of cyclin-dependent protein serine/threonine kinase activity | Interproscan |
| GO:0005675 | Cellular Component | transcription factor TFIIH holo complex | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006289 | Biological Process | nucleotide-excision repair | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0045737 | Biological Process | positive regulation of cyclin-dependent protein serine/threonine kinase activity | Interproscan |
| GO:0061575 | Molecular Function | cyclin-dependent protein serine/threonine kinase activator activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10842 | MNAT1; CDK-activating kinase assembly factor MAT1 | - | Basal transcription factors | ko03022 | PMID: 28812709 |
| Nucleotide excision repair | ko03420 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_45868-0.18 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
