Gene detail

Detailed information of Bpl_scaf_45345-4.9 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_45345-4.9	RIBOSOMAL PROTEIN S6 KINASE	Bpl_scaf_45345	376002	421872	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_45345-4.9

Transcript

Bpl_scaf_45345-4.9

ATGGACTTCAGTGGAACCTCAGATGACTTTCCAGCTCTTTATGGGTATACTGAGATGTACTACATAGCAGCCCACTTCTCAATGGACACAGAGGACCTGCAGCTACAATGGCAAGATTTTATACAACTTCTCAACACAATGCCAACACAGGACAGATCAGTGACCAGCCTGCTTCATTTACTACACAATTCAGATGACACAGGACTCAAGAACATGTACCCACTGGTGTACAGGCTGTTCAGCATTGCCACCACTCTACCACTTAGTACAGCAGAGGTTGAGAGAGTTTTTCACAGTCCATACCGGTATTACCCAAAGCAGAGCCTGTCACGGTTATTTAGCATAAACACTATTCATAATTTCCTATGCACAGTCCATACCGGAGACCCATGTACAATATCATCACAGGTAGAACTTGATGAAGCCATAAGACTTTATGAACTTAACAAGGACTCAGAACTCACACTTCATGTTTTCCCAAATGTACCACAAAGACCAGGGATGCCATGTGTTGGCGAAGACAAAAATATGTACAGGAAAGGAGCTCGACGGTGGCGAAAGTTATATAGAATGAATGGTCATTTATTCCAAGCAAAAAGATTTTCAAAGAAAGCCTTCTGTTCATTTTGCGCAGACAGAATATGGGGACTTGGTCGTCAAGGTTACAAATGTATACAGTGTAAATTAACAGTACATAAAAGATGTCATAAACTGCTCAAGGTTGTGTGTGGTGCTCCTGTTATGCAAAATCAAAATGAAGAAGGTAGAAATGACTCACCCAGTAGAAATTCTGCTCCCAGATATCAACCTCCCATACAGGATAATAGTATTGGTCTGAAAGATGCCACAAATGGTGAATCACATGATCATACAGCATCAATGGAAGTTAGCACAGGGACAGAAGAAAGTGAAGTTAAGAGTGAGGTATTGCACATTACAACGAATGGTAATGAGAGTGGCAGAGTATCGTTAGATCAGTTCCACTTACTACGTGTGGTCGGACGAGGAAGTTATGCTAAAGTATTGATGGTGGAACAAAAAACCACTGGCAGAGTTTACGCAATGAAAGTGATTAAAAAAGAATTGGTCAACGATGACGAGGATATAGATTGGGTACAAACAGAAAAACATGTATTTGAAACAGCAACAAATTACCCATTCTTGGTTGGTTTACATTCCTGCTTCCAAACAGATAGTCGATTATTTTTTGTGATAGAGTTTGTCAGTGGTGGAGATCTGATGTTTCACATGCAGAGACAACGGAAATTAAACGAAGAACATGCCAGATTTTATGCTGCTGAAATTTGTCTTGCCTTAAATTTCCTCCATGAAAGGGGTATTGTGTATAGAGATTTAAAATTAGACAATGTATTACTGGATCACGATGGTCATATCAAGTTAACAGATTACGGAATGTGTAAGGAAGGTTTACGGCCAGGAGACACGACATGCACATTCTGTGGTACCCCTAATTATATAGCACCAGAAATCCTTAGGGGTGAAGAGTATGATTATAGTGTTGACTGGTGGGCGCTAGGTGTACTCATGTTTGAAATGTTAGCAGGACGATCACCATTTGATGTGGTGGGAGGAGCAGAGAATCCTGACCAAAATACAGAGGACTACCTCTTCCAAGTTATATTGGAGAAAACGATAAGAATTCCAAGATCATTATCAGTAAAAGCAGCATCTATACTTAAAGGCTTTCTTAATAAGACTCCAGTTGAACGATTGGGTTGTCATCCACAGACAGGATTCAGTGATATAATGTCACATCCATTCTACCGATCAATAAACTGGGACCAGTTAGAACTAAAACAGATCAAACCACCATATAAACCAGAACTTAAATCTGACCGAGATCTGGAACATTTTGATAAAGCCTTTACAGATGAGCCAGTACAACTCACTCCAGACGATCCTAAAGTGATATCAGATATAGATCAAACAGAATTTGACGGCTTTGAGTATGTTAATCCTTTACTGATGTCTTTAGAAGAAACAGTATAACCTTGTATATATGTAGTAATAGTGTTGGTTGTGATTTCTTAACAAGAAGTCCTGGTTGTGCTGGATGTCACCAGAAGAAATAAAGAAAACGTTTTTTTTTGTGTTTTTTTTTAGCTCACCTGACCCAAAGGGTCATGTGAGGTATTGCCATCATTTGGCGTCCATCGTCCGTCCGTCGTCCGTCCGTTAACTTTTTCATATTTTAATCTACTCCTCTGAAACAACTGGGCCAAATGGAACCAAACTTGGCAGAAAACATCTATATAAGGTCCTCTATAAAGTTTCTTCATTTCGTCCCATTCCGCCAACAAATATGGCTGCCAAGGGCAATTCTTGTTTCTGATTGGCTAATGTTAAAAAAATCTTCTCCTCTGAAATTGCTTGGCCAAATGGAGCCAAACTTGGCAGGAAGCATCTATGTAAGATCCTCTATAAAACTTCTTCATTTTTTTCCATTCGGCCAACAAACATGGCCGCTGTTACTAAAAATAGAACATATGGTAAAATTGCAGGTTTTTGGGTAATAATATCAAAAATCTGACATGGGTTAAAATGATCAGCACAGCAAGATCTATCTACCCTGCAATTTTGAAGTAAATCTGATTACCCATCTTGGAGTTATTGGACTTTTTTCATCAAATTTTTAAAATTTTAATACTTTTCGTCTTATATTTCAAAAACTATAAGAGATAGATGTTAAGTGTAAACTGAAAACATGTTCAGCTTGTCAAGATCTACATGCCCTGCAATTTTGAAGTAAATCTTATTACCTGCCTAGGAGTTATTGCCCTTTTTTCATAATTTTTTAGCTCACCTGGCCCAAAGACATTATCTTTTATGCATATATATAGAAAACAGTTAAGGTAATGATTATCTCCCTTTGAAATTTGCTTCAGTATCATTCTATTGTCAGGTGAGCGATACAGGCTCAGTGAGCTGAGCCTCTAGTTAAGACTTTGGTTGTGTCTGAATTTGATAATAATAATAGTTGTATAAAAGTGAAATCTGTCTAAACTGAACCTCCCTAGGACCAACATTTGCGTTCGTAATAGACAGGTGTTTGTTTTATGATTTCCTACATAGAGACTGTATTTAAAGTTCGGAATATACAGGATTTCGTATTATCCAGGATTCGATTTAGGCAGGTTTCACTATAATGAGGAGTGCTGATTGTTGGTGTTACAAGGAGAAAAGTTAATAAAAGAACAATTATTTAAAACATTGGTTGTGACTGAATTTAATCATAAGTGCTAATTTTAGATATGGCAGGTTTTTTTTTGTAGCATAGTCTGTCAATAGCCAAACTAAATATTTTTGTTGACCAAATTTTATTCTTCAGTATTAGTTCAGACTAGTTTTTGTTTACGCACTTACTGTTTTGTAGCTCACATTCCATTTGTTCAGTAAAAAGGAGATAAAAAAAC

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|PB1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00130	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00433	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000961	Domain	AGC-kinase, C-terminal	Interproscan
IPR002219	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR017892	Domain	Protein kinase, C-terminal	Interproscan
IPR020454	Domain	Diacylglycerol/phorbol-ester binding	Interproscan
IPR034659	Domain	Atypical protein kinase C, catalytic domain	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24351	RIBOSOMAL PROTEIN S6 KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007163	Biological Process	establishment or maintenance of cell polarity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06069	PRKCI; atypical protein kinase C iota type	EC:2.7.11.13	Rap1 signaling pathway	ko04015	PMID: 28812709
			Hippo signaling pathway	ko04390	PMID: 28812709
			Hippo signaling pathway -fly	ko04391	PMID: 28812709
			Endocytosis	ko04144	PMID: 28812709
			Tight junction	ko04530	PMID: 28812709
			Platelet activation	ko04611	PMID: 28812709
			Insulin signaling pathway	ko04910	PMID: 28812709
			Human papillomavirus infection	ko05165	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_45345-4.9 global RNA-seq network