Gene detail

Detailed information of Bpl_scaf_45345-4.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_45345-4.8	F-ACTIN-CAPPING PROTEIN SUBUNIT BETA	Bpl_scaf_45345	457831	475763	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_45345-4.8

ATGGCCAAGTGTCTAACAAAATGTAAATCTTGTAACATTGTAACACCTATGTCTCCATGGAGTAACGAATATTTCCCTTCACTTGAAGATGGAGCCAAGCCCTCAGAAAGACTTAGAAAGTTAGAACAAGAAGCCAACAGATCATTTGACCAGTTTAGAGAAATGTATTTTGAGGGTGGTGTATCTTCAGTTTACCTGTGGGATCTAGACCATGGTTTTGCAGGAGTTATATTAATTAAGAAAGCTGGAGACGGATCACAGAAAATTAAAGGCTGTTGGGATTCAATACATGTTATAGAAGTACAGGAAAAATCTAGTGGTAAAAGTGCTCACTATAAGCTAACGTCAACAGCTATGTTATGGTTACAGACAACGAAGGATAGGTCTGGCATTATGAACCTCGGTGGTAATTTGATGCGACAATTAGAACGAGATTGTCCTGTCACTGAAGGATCACCTCATATTGTAAACATTGGTAAAATGGTAGAGGAATTGGAGAACCAAATCAGGAACACGCTGAATGAGATTTATTTTGGTAAAACAAAGGACATAGTTCATAGTTTACGCTCACTCAATCCCTTAGAGAATGCAGCCAAGCAGAAAGCCATGATTAGCGAGATTACAAATGTTATAAGTCAACGGGATAAAAAACAGTGATGTCACCCCGATACTTAGTGCAAACAATTCTATTTTTATTTCAATTGTCAAGCAAAAAAAACATAATGCTACTACAAAATGGCACTGCAATCATTAGACTAATCAAATGGTGCAAATTATTTGATTTTTTTTCATTGTCTGCTGAATGAAAACATTTTTACTTGATCAGAAATTTATGGAGAAGTTTCATATTAACCGGTACATTTATTTTCTATCCTGTATATAAAATTTTGATGAAAAAAAAAGGACATCCATTGAAAAAATAAGTATTTAACATTAGAGATGTATACTGTAATATGTATACAAAGTTTAACCCATTTCCCTATGATCATTTTGCTACATTCATTTATATTATGACTACATGTGCAATCAATTCCTATCACCATTAACGTTGTGAGTTTGAATCCTGCTCATGGTGAGATGTACTCAATACATTATGTGATAAAGTTTCTCAGCGACTTGCGGCTGGTCGGTGGTTTTCTACAGGTATCCCAGTTTCCTCCACCAATAAAACTGACCACCACGATATAACTGAAATATTGTTGAAAGTGGCATTAAATACCATAAACCTAACGTTAACCAATTAAGAATTATGAGTAAAATTGCCTTAATAACAGTGTTTCGTAAGGGGAGGTAAGAATAATTCATGATTTGTGAAGGGAGATAATTATGTAATAAACAATGATCGAATATCAATTAACAAGCCTAAGGAGTTTTTCCCCCTGTACAAATCATTATTGGTTTGCACAAGTTAAAGGGCCTTAAAAATAAAAAAATATATATATAATATAAAAATGATGGTCCAGTGTTTTAAGATTCCAGACTTTTTACTATGCTTTCTGTGTATGCTGTAATATAAAAGGCAAGTTATGATGCATGAATATGCATTTATCTGTGAATTAAAATCTTGTTTTGTTCTTTGTATAAGTAACAATGTACAGTAAAACCTTCCCATGTGGTCACCTCTATTAAGCAGTCAATTGTATTTAAAGGTCACCTGTCTTATAAGGCCACTTTTTCTTTGTCCCAAAGGTGACCTCTTAGTACAGGTTTGATTTTAATTGATTGTGAACTGTCTCTTTCATGTCTTTTAATATTTAATTAGAGAATCGATAAACATATTTATGAAGAAAATTATAATATTGTATATATAATTAATGCACTGTATTTAAAAATATTATTTTAATTTCAAAACAAATTAAAAATCTTGGATAACAAATAGATATAGATTCTCCTTCTGCTACCATTGTTTTGCAATATTTAAATCCATCAGTTTCTTGCGACATGTTAATGATTTTCTCCAGTACTCCAGGTTTCCTCCACCAATAAAACTGACCGCCATGATATAACTGAAATATTGTTGAAAGTGGCATTAAACACCAGAAACCAAACCAAACCTTTTGAAAGTTTAACAATCGAGAGTTGAGATATGTCGTATTCTGCTGGTTAGAGAATCTGTTTCTCCAATTAATACCGAAATGTCAAAAATACTGTTGCTTATTTCAAAAGTTGTTAAATTCCATCATTGCATTGTATGAAATACAATTCTTTGTATTCTTCTTGACGGGGACGGATATGTTGGAAAACTTTCATTTTTAATTAAAAAAAAAATATTTATATATAATTTAGGTAAAATACAGCTATGCAAACCTTTTTGTCTTTGTACTGTTATAAAGAAATTGAAAAATAACAATAAAACTTTGAATTCGTCAAATGTTTTTCAAAGGTGCGAAAAAAAAGTTACTTTTTTTTTTTATATAAGTACATTGATTTTATTGCACTTTTGATATACCCCCAAGATTTACTGTGTTTGAAATCAATTAAAAAAGAGGTCATCTATTTATAGATTGTTAATTAAATTGATTTCATTTGTTCTTTCTTCTACAAAACATTAGGAATTTTAATTTTGTTTGAGATTAACCATGTTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01115	F_actin_cap_B	F-actin capping protein, beta subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001698	Family	F-actin-capping protein subunit beta	Interproscan
IPR037282	Homologous_superfamily	F-actin-capping protein subunit alpha/beta	Interproscan
IPR042276	Homologous_superfamily	F-actin-capping protein subunit alpha/beta, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10619	F-ACTIN-CAPPING PROTEIN SUBUNIT BETA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000902	Biological Process	cell morphogenesis	Interproscan
GO:0008290	Cellular Component	F-actin capping protein complex	Interproscan
GO:0010591	Biological Process	regulation of lamellipodium assembly	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0051016	Biological Process	barbed-end actin filament capping	Interproscan
GO:0051490	Biological Process	negative regulation of filopodium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10365	CAPZB; capping protein (actin filament) muscle Z-line, beta	-	Endocytosis	ko04144	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_45345-4.8 global RNA-seq network