| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_45183-4.11 | HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE | Bpl_scaf_45183 | 430280 | 465529 | - |
| CDS | |||||
| Bpl_scaf_45183-4.11 | |||||
| Transcript |
| Bpl_scaf_45183-4.11 |
| Protein |
| Bpl_scaf_45183-4.11 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Alpha-Helix|VHS |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00790 | VHS | VHS domain | Repeat | Interproscan |
| PF01363 | FYVE | FYVE zinc finger | Domain | Interproscan |
| PF12210 | Hrs_helical | Hepatocyte growth factor-regulated tyrosine kinase substrate | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000306 | Domain | FYVE zinc finger | Interproscan |
| IPR002014 | Domain | VHS domain | Interproscan |
| IPR003903 | Conserved_site | Ubiquitin interacting motif | Interproscan |
| IPR008942 | Homologous_superfamily | ENTH/VHS | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017073 | Family | Hepatocyte growth factor-regulated tyrosine kinase substrate/VPS27 | Interproscan |
| IPR017455 | Domain | Zinc finger, FYVE-related | Interproscan |
| IPR024641 | Domain | Hepatocyte growth factor-regulated tyrosine kinase substrate, helical domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46275 | HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005769 | Cellular Component | early endosome | Interproscan |
| GO:0031623 | Biological Process | receptor internalization | Interproscan |
| GO:0032456 | Biological Process | endocytic recycling | Interproscan |
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12182 | HGS, HRS, VPS27; hepatocyte growth factor-regulated tyrosine kinase substrate | - | Endocytosis | ko04144 | PMID: 28812709 |
| Phagosome | ko04145 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_45183-4.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
