Detailed information of Bpl_scaf_44427-3.9 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_44427-3.9DNA REPAIR PROTEIN REV1Bpl_scaf_44427337199365475+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00817IMSimpB/mucB/samB familyFamilyInterproscan
PF11799IMS_CimpB/mucB/samB family C-terminal domainDomainInterproscan
PF14377UBMUbiquitin binding regionMotifInterproscan
PF16589BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan
PF16727REV1_CDNA repair protein REV1 C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001126DomainUmuC domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR012112FamilyDNA repair protein Rev1Interproscan
IPR017961DomainDNA polymerase, Y-family, little finger domainInterproscan
IPR025527Conserved_siteHUWE1/REV1, ubiquitin-binding motifInterproscan
IPR031991DomainDNA repair protein Rev1, C-terminalInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR036775Homologous_superfamilyDNA polymerase, Y-family, little finger domain superfamilyInterproscan
IPR038401Homologous_superfamilyRev1, C-terminal domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR047346Conserved_siteDNA repair protein REV1, ubiquitin-binding motif 1/2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR45990DNA REPAIR PROTEIN REV1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0017125Molecular Functiondeoxycytidyl transferase activityInterproscan
GO:0042276Biological Processerror-prone translesion synthesisInterproscan
GO:0070987Biological Processerror-free translesion synthesisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03515REV1; DNA repair protein REV1EC:2.7.7.-
Fanconi anemia pathway ko03460PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_44427-3.9 global RNA-seq network
TOP