Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
Bpl_scaf_44216-0.7 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 | Bpl_scaf_44216 | 12110 | 70362 | - |
CDS | |||||
Bpl_scaf_44216-0.7 | |||||
Transcript |
Bpl_scaf_44216-0.7 |
Protein |
Bpl_scaf_44216-0.7 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00773 | RNB | RNB domain | Domain | Interproscan |
PF12171 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding | Family | Interproscan |
PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
IPR001900 | Domain | Ribonuclease II/R | Interproscan |
IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
IPR022755 | Domain | Zinc finger, double-stranded RNA binding | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR039691 | Family | Zinc finger CCCH domain-containing protein A/B | Interproscan |
IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR14928 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0004386 | Molecular Function | helicase activity | Interproscan |
GO:0004540 | Molecular Function | RNA nuclease activity | Interproscan |
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0035196 | Biological Process | miRNA processing | Interproscan |
GO:0035198 | Molecular Function | miRNA binding | Interproscan |
GO:0046872 | Molecular Function | metal ion binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for Bpl_scaf_44216-0.7 global RNA-seq network |