Detailed information of Bpl_scaf_44020-4.7 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_44020-4.7PHD/F-BOX CONTAINING PROTEINBpl_scaf_44020400928459693+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF17811JHDJumonji helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003347DomainJmjC domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR041070DomainJumonji, helical domainInterproscan
IPR050690FamilyJHDM1 Histone DemethylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23123PHD/F-BOX CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006482Biological Processprotein demethylationInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19415PHF8, JHDM1F; [histone H3]-dimethyl-L-lysine9 demethylaseEC:1.14.11.65
EC:1.14.11.-
Chromosome and associated proteinsko03036PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_44020-4.7 global RNA-seq network
TOP