Gene detail

Detailed information of Bpl_scaf_43993-0.1 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_43993-0.1	VACUOLAR ATP SYNTHASE SUBUNIT G	Bpl_scaf_43993	15409	22673	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_43993-0.1

TTTACAATTCCAATCAACAGCAGATAGGTCGTAATTTAATACACCCATCACTTCCTGTCATAAGATTACGACGAAAAACTATCTGAAAATGGCAAGTCAATCGACAGGGATTCAACAGCTCTTACATGCTGAAAAGAAAGCTGCAGAAAAGGTTTCCGAAGCTAGAAAACGTAAAGCCAAGAGATTGAAGCAAGCTAAAGAAGAAGCACAAGCAGAAATTGATGGGTACAGAAAACTTAGAGAAGATCAATATCAGAAATATGAAAAATCTATCTTAGGTTCAAGGAGTGATATGGAATCACAGATCGACCAAGAAACAAAAAGGAAATTGATCGAAGTAGATTCAAATGTCCGTAAAAATAAAGACGGTGCAATTAAAAATTTACTTGACTTTGTCATGGACATACAGCCAGAACTACACAAAAATTATGTAGAATAATGTTGTTCTAGTAGTAATTATGTGTCCTATCATATTGTAAACAAGATTAGATTATGTAGAATGTTGATTTTTTGGAAAAGTATATATTAAGTTTTTTTTTCAAACATCTGTTCAAAATTCTGGAAAGTAATACAACTGGGTATACAGTATTGTTTCAAGACAAATAAATCTTGTAATATCAGAAAACAGTATGTAAAAAACATATGTTAGTTAAAATCCTGTATTGTTATTAGATTTTCAGAGGTACATGTAATTAATGAGGTGTATTTATATATGTATCCAGATAAGGATTAGGCAAGTATGTGTAGTGCGCCTTGGAAATTACGCACATTTTATCAGCTTTGTCTTCATATTGTATGCTAGTTCTGTAATACCAGTGCCATTTTGCATACCGGTACATATTTTTGGTTTTGAAATATTTTTTATGGAAAATAACCATATTAAAAAGAAATTAAGACATAATTTTCGTTATCAATTTTCCATCGACATGTAGATGTGTATTTAACACAGTTTTCCCCAATTTTTATATGGATATGTAGTAAATACATTTGTATGTAAGGATTTATATATGTGTACTTATACTTACCGGTATTTGTTTGAATGAATGTTAAATATATTGTAATCAGAAACAGATTTAAAATATTATAATTGTATTTTTTTTTTCTCAAACTAGTCAATTATTATTTTTGGTCATATTATATATATATATATATATACCGCTATTCTTCTGAAGGAATCAGAATAATGAGTTTAAGAAGTTCACGAGCAAGACGCCTGGTTTTTCTGACAGAAATAAATTGATTTACGTTTGTCATGAAGCTAAAGCTACATATGATGGTACCTGCATGTTGTACCATGTTATAAGCCCCGCCCATTTTCATTTGTATTCTTCACAGTTTTAATGGCTGGTTAATTGAGTATGGTACAGTATCAGTTGTAGATATTAAACCATGGTTTTCTACAACCTCATTTTTAAGCTGAATAATTCATAAAAAAAACATCAAAGAATAAAAGGTCATTTATGTTACAATAACATTTTAAATAGTCTATCCTAAATAATTACTATAGAAAGATTTTCTATGCTTAATTTAGAAATCTGTAAAATGTTCACCCCCCCCCCCCTTTTTTTTCTTTTTTTTTAAGATTTTCTAGGCTTAATGTAGAATCTGAAAAATGTTCCCCCCCTGTTTTTTAAAGATTTTTCAGGCTTGGAATCCATGTTTTATTTATTATGGTGGTTCAAGATATTTATAATTATAGCCAGGATACACAATTTTGATTGAATGAAGATGGTATAATAATTATAATATATATATATGTTGTCTTTTCTATATCACTGTTATTGTTGAAGTCTAGAGCATTCCAATAAAACAAAAATGACTTGTCAAAAATTATTCGTTGTATCTTGTTTCAATAAAAGATGTCTTACATTTGCAGTAAAATGACAAAGTTAAAGAAAGGAGTTATAGCACAAATGGGTATGTCGAAACATTTAAGGGGTAGTGTCTGAAATTCTGATTATTTTCTCCTGCTATTTTTGTAGTGAAACAATAGTATAAACATTGGATAAAACATGAAAAGTTTTACAATGTAAATCTGTTAACGTAATGGGCTATTGACCAAGATAAATACTGATGACATAATGGGCTCTTGACCAAGATAAATACTGATGACGTAATGGGCTATTGACCAAGATAAATACTGATGATGTAATGGGCTATTGACCAAGATAAATACTGATGACGTAATGGGCTATTGACCAAGATAAATACTGATGACATAATGGGCTATTGACCAAGATAAATACTGATGACGTAATGGGCTATTGACCAAGATAAATACTGATGACGTAATGGGCTATTGACTAAGATAAATACTGATGACGTAATGGGCTATTGACCAAGATAAATACTGATGACGTAATGGGCTATTGACCAAGATAAATACTGATGACGTAATGGGCTATTGACCAAGATAAATACTGATGACGTAATGGGATATTGACCAAGATAAATACTGATGACGTAATGGGCTATTGACCAAGATAAATACTGATGACGTAATGGGCTATTGACCAAGATCAATATTGATGACGTAATGGACCTTTTGAACATTCCCAATTTAAATCTAAAATTATACGTTTTTATACCTTTCATATAGACATTATTTCCCTTACAAGGAGCAAAGTGGCACCAGGTCTAGGAAGAGCAATGGAAAGGACAACAAATTTGATTAAATTTACTCATAATATGTAGATATTGGAACCTCTTAAAAAATCAGAGGATAGTCTTATAGCAAATAGAAAATTTACAAATTTACAAGTTAACAAATTATGAGAAAAAAAAATTATGATATTTTCATTGAACTTTGCATGACAAGAGGGGGGGGGCTTTTGTCTGCCTTGAAGGGAAATAACTCTTGTAAAGCATATAATTTTAGAATCAAAAGTCGTTAATGTGCAATTAGGTAAACTTTCTGGCAAAATAGAGACGGCCAAAAATTCGTTTATAAATCTTAATCTATTAGCTATTTTTCTCCACCATTGGTCAAGATAGTGCCCTATGTTGATTCTTATGTTATTATTTCCTGACATTAAACAAAGCTTCTTTTCTTTCCCTATTTTAGCAGAATCCATTCCATTGCATGTGCAATCTATAGCATTTGTTGCTATTTTTAAATCAATGAAAATTGTACTAATGTATGTCTGCAGAGTTAAAAGTCATCAATGCATCTCTCAAATAAAATTAAATTTTATGAGCTGTTGTCAGGACTCGGGACAACAATTTTCGTGTATCTTGAAAAGGTTGATTTTATACTTTAGAAATATGGTCTGCTTGGTATTTATAATTTTAATATCTTCCCAGTAACTATTTATGTGGGGGGTGGGGGAGGAATCGCAAACACTAGACCTTTAAATTAAGCTCTTTCAAGTTGAAGAAATATAAGAAAGTTGGATTAAATTTCTTCAAGTTTGGTTAGAAGAACTATAGATACACAATTGGCAGAAGACAACAGAAAGAAATCCATATAATTATGTCAACTTTTGTAAGTTGTTTGTTGTGTTGACCATTACTGTTTAGCTTCTTTTTGACAATCTATTATGCCTGCAACACAATATTTATACAAATTAAACTGATATACAATCTTACAAATATTACAACTCAATCACTATCCTGCTACATGAGAAAACATTTCAGACCATCCAACTAGAAGACAATTTGACAGATTCTTTAAATACATTGCAATAGATTTCATCACATAGAAGATTTACATCCATGGCCTATGAGAGAGGGATTCAGCCGGTACATCGATCCTGGGCCCAGAGAGCAAGAAGGGGCCTTTGAATTTCTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03179	V-ATPase_G	Vacuolar (H+)-ATPase G subunit	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005124	Family	Vacuolar (H+)-ATPase G subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12713	VACUOLAR ATP SYNTHASE SUBUNIT G	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016471	Cellular Component	vacuolar proton-transporting V-type ATPase complex	Interproscan
GO:0046961	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600	Biological Process	proton transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02152	ATPeV1G, ATP6G; V-type H+-transporting ATPase subunit G	-	Oxidative phosphorylation	ko00190	PMID: 28812709
			mTOR signaling pathway	ko04150	PMID: 28812709
			Phagosome	ko04145	PMID: 28812709
			Collecting duct acid secretion	ko04966	PMID: 28812709
			Synaptic vesicle cycle	ko04721	PMID: 28812709
			Rheumatoid arthritis	ko05323	PMID: 28812709
			Vibrio cholerae infection	ko05110	PMID: 28812709
			Epithelial cell signaling in Helicobacter pylori infection	ko05120	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_43993-0.1 global RNA-seq network