Gene detail

Detailed information of Bpl_scaf_43951-0.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_43951-0.5	RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT	Bpl_scaf_43951	1272	44031	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_43951-0.5

TTAGGATACTGATGTATTTGAAATAACAGATTTTACCACAGCATCAGATTGGGAAAGATTTATAGCCAGACTTGAAGAAGTTTTACATGAGTGGAAAGTAGTCAACAATAAACCAAAACCACCTGCGGTCAAGGATGAGTTTTCCAAGGGAACTTGGTCTGAGAAGAAAGAAGACATTTGTTTTGCTGATTTTAAGTTTCTTATAACATATCATGTCTTAAATAGAACAGAAAGTAGAAGTGAGTCGTTAGATAGACAAAGTCCTGATAATGATGTGGAGGATGAGGAGAGAAAAGAAGATGAGATACCAACTGTTCTGTCAGATATAAATAGTACCAACAATGATTTCCCATGTAAAGCACACTGCTTGGTGAGATGGTATGGATTACAAGAATTTATAGTGATTACACCTGCAGATAGAAATAAAGCTATAGACAGTGAGAGTAGAGCTAAGGTTTTACTGAGTTCTGTGTCTATAGCCCTTACTAATGCTTCCAGTTCATTGCCTGTGTTTATTCAGACCCAGCAGCCATGGAGACAGATGTATTGTGGGACAAGTGTGATGCCAGAAATGTCTGTAGAATTTGATGTCATACAACTTAATCGTGTACCACAACAGTACTCTCATCTAGCAGGACTGTTGGATGTATTCAAGTCAAAACTGGCCACACAGGTAACACCCAGACCTACAGTTGATGTTGCTGTTAGATTTACTTATAACTTACAAGAATGGGTTAACTCCCCTTGGCCACAAGAACCACCAGATTTCTCGTCTCCTATGGAGGATGAGGTTGGTTGTTCGTCATTTGGTAGTCTTCCATTTGGAGCTAGTGAAGATCCCATCAGTTCTCTGAATTTGTTCTGTACATGGTCTAGTCTTTCTGAGGATATGATTGTAGAAAACCAAAATTACAGTGACCTTGACCCTCTACAAGCACCACAGTGGACAGCTAAAGTAACAAAGTCTGATGATCCTCAATGTTTATTAGGTAATTACGTACATATGTTTTTAAAACACTGCTACAGTAAAGAAACAACACAAGATTTGTTGTGGAATATTTTATCTGAAGAGGTTGATAATGAAAATGCAGCTGATATCAGTCAAGCTTTACACAGATTGACAGAGAACAAAGTTGGTTATAACATTCCATCCCTAAGTAATGTTGTATCTAGAGCAGGAAGTAGATTAGCTGTCAAACAAGAAGAAGCTCCAATATCACAAGACACTATTAGTGACATTCTTCTGTTTTTATTTCCTGATGCAAAAGATCCGTTGGAAAAAGCAAAAGATGACAGGGAAAATGAAAACTCAGAAAATAATAATAATCCTAAATTTGAAGCTTTGTTAGAGTCCTTGCCAAAGACATTAAAGACAGCCCCTACAGACAGTTTAGTTTACAGATTAGCTGTGTGTTTATGTATAGTCAACAAGAATTATGGGGGTCTTAAAGGGTTAGCTCAACTCTGGCAAGAATTTGTACTAGAAATGAGGTACAGATGGGAGAATAAATATGAAATTGAAGGAGTAAATAAGTCAGCTCCACACTTAGGTTCCTGTCTTCTGTATCAGAAATTACAAATGTTAAACTGCTGTATACAGAAAAAAATACAAAGAGAAACGTTATATAAAGGTTACACTAGTCAATCCAATATTGATTCTAACTCTAGTGACACCGACGTAGAAAATTGTGAAAATAAAAATAGAACAGAAGCATGTGCTAAAGCTATTGCACGACAGAATAGTGATAGTAGCTCTGCCGATGATGATGAATTTTATGAATGCGAGGACTCCCCGTCAAAATCTCAATCTGAGTTGGAGAAAGATATTGACGAAAAGGAGGATAATAGTGAACAAATGGACATGTCAATTAGTGAATCATCATCTTATACAGACTCTGTATCACATAAACCAGAGGGACAGTTATCTCCCTGTAATGATTTAAAACTGTTAAATACAGGGGACCAGCTCTATATTCCAGTCACACAGGAACCAGCACCTATGACAGAGGATATGTTAGAAGAACATGCAGAAATTCTTGCCAAACTAGGAACTTCATCTGAAGGAGCACGTCTGAGGGCTAGAATGCAAAGTGCTTGTTTAATATCAGATATGGAATCATTTAAAGCAGCAAATCCAGGTTGTTTTCTTGAAGATTTCGTAAGATGGTATTCCCCTAGAGATTGGATAGAAGAAGAGTCGACAGTTACAAATGATAATACACAAATTAAAGGTCATCTTAGTCAAAGAATGCAAATACCAGGAAATGTGTGGTTTGAAGCCTGGCAGAGTGCCAAACCAGTTCCTGCCCATAGACAGAAAAGATTGTTTGATGATACAAAGGAGGCTGAAAAGGTCTTACATTTCTTGTCGTCCATGAAACCAGCTGATGTTATATTACAACTGATGCCATGTTTAATTCATGCAGCTATTATCAAAGTAGTAGAAAATGGTATG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13890	Rab3-GTPase_cat	Rab3 GTPase-activating protein catalytic subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026147	Domain	Rab3GAP catalytic subunit, conserved domain	Interproscan
IPR045700	Family	Rab3GAP catalytic subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21422	RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18270	RAB3GAP1; Rab3 GTPase-activating protein catalytic subunit	-	Membrane trafficking	ko04131	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_43951-0.5 global RNA-seq network