| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_43503-0.8 | PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5 | Bpl_scaf_43503 | 2458 | 17608 | - |
| CDS | |||||
| Bpl_scaf_43503-0.8 | |||||
| Transcript |
| Bpl_scaf_43503-0.8 |
| Protein |
| Bpl_scaf_43503-0.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003029 | Domain | S1 domain | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR045209 | Family | rRNA biogenesis protein Rrp5 | Interproscan |
| IPR048059 | Domain | rRNA biogenesis protein RRP5, S1 domain, first repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23270 | PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14792 | RRP5, PDCD11; rRNA biogenesis protein RRP5 | - | Ribosome biogenesis | ko03009 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_43503-0.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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