Gene detail

Detailed information of Bpl_scaf_43466-5.11 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_43466-5.11	PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE	Bpl_scaf_43466	564536	583560	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_43466-5.11

CTGAACCTTGCCCGTTTGACAATCATGGATAACCCTGAAAGATGCATTCAAAATTATAAATACGTATTTCAGAAAGATATCTTAAGAGGTAAAGTGGCCTTTGTTACTGGTGGAGCATCAGGGATATGTTTTACAATAGCAGAGATTTTAATGAGACATGGTTGTGATACGGTGATAGTCAGTCGACGTCAAGATAAGCTCAAACAATCAGCAGATCTACTGATGAAGGCTACAGGACGAAAGTGTGTACCAATACAAATGGATGTTAGGAAGGTGCAGCAGGGAACTTCTTAGCACCAGCAGCCGCATTGTCGTTTAATGCATTTAAAACTGTGATGGAAATAGATGCACATGGTACATTTAATGTTAGCAAAGTGGTATATGATAAATATTTAAAGAATAATGGTGGTGTGATAGTTAATATAACAGCAATGCTACATCAAAGAGGTACAGCTTTACAGCTACATGCTGGGTCTGCTAAAGCTGCTATTGAGGCAATGACAAAACATATGGCTGTAGAATGGGGACCAGATCGTATCCGTGTCATGTGTGTGGCTCCAGGTCCTATTGGTGATACAGAAGGAATGAATAGACTAGGTGGAAAGCACTTTAATAAGGAACTAGAAATGGGGATACCAATACAGCGTATAGGTACCAGACAAGATATCGGGGATACAGTATTATATGCAGTCAGTGACGCAGCCCAGTTGTTAACAGGGACAACTATTATAGCAGACGGGGGTAGTTGGTTGACGGACAGCAATAACTTTTACGCAAGGAGCTCAATGTTGAAGAAATACGCAAAATTATAATAATTTTCATTTTGTTTATTGATAAATTTATATTCTAGAATAATTTTATTGTAATCAACAGAGATATGTGATATTTAATTAATATTTTAAAATTAATATATCTGATAAATGAAATTTTTTTTTTAAATAGTGTGAATCAAAGATACATTTTTGTATATGTATTTTATGTAAATACAGAATATCTATACAAAATATGAAGTCCTAATAAAAGATAATAATGTTATAATTACTATATGAAATATACATTTCAGTAAACGGTCTTATATTACCCGCATTGGTGCATAATCTGCACCCCCTTTTGCTCCCAAAATCTCAGGAGAAAAAACCTAGTTCAGATAATCAACATCCACATAACCGAAAATCCTTTTAAGGGTAAATATCTACGTCTAATACAAGGTTTTTTACGGTAATATATGTGGTCAATAGACTTAAGTGGATTTTTCTACTCAATGTTTTAAAATGCAGACTTTAATAATTATATCTTGGAGATTATATGAAGTGGTGAATCAACGCCTGACAAGGTGCGCTATGGAGACATATATCTAGGTTGATACCTGAGGAACATGCAGCAGTTGTCGGTTAATATAATTGTAAACGTACTATCCCAAGGTGGCGTAACATGTAAAATCAAAAGTACCGCATTGATCATTCTTTGTTGTTGTCTCACTGTAGTACATCTCAGAGATTAATATACCGTCAAACATGTATCTTAAAAAAGGTCACATTTGGGACAAATTGAAAGTGGTCGTTAGACAGGTGATCTCTTATTAAAGAGGTTCCATTCATATCAAATTAAAAAAAAAAATTAACTGGACAAGGAAAAGGTGACCTTTTAATACAGGTGACTGCTTAATAGAGGTGATTGCATGGGCAGGTTTGACTATATGTTTTTGGTTAGAATTTACCAAATGAAGTAACTGTTACATGTATGAAATTCAATAAGGTGATTCTGTAAAGAAATGTCATAATAAGAAAAACACCATGACAAATTCTTCCAGTTGTGACTTCCTATAATTGAAGAACATTTAAAAGGGGCTTTCGTCATTGTAATCCTATGGTAGCTATAGTTGGATTTGCAACTAACCATGCAATCGGTGGCCATCACCACTAATGTTGGGAGTTGGAATCCTGTTCCTGGCGAGGTGAATTCAATACATGTACAACATTATGTGAGAAAGTTTGTCAGTGACTTGCAGCAGGTCGTGGTTTTCTCCTCCACCAATAAAACTGACTGCCACATATAACTGACTGCC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13561	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR045017	Family	Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43296	PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0008670	Molecular Function	2,4-dienoyl-CoA reductase (NADPH) activity	Interproscan
GO:0009062	Biological Process	fatty acid catabolic process	Interproscan
GO:0016628	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13237	DECR2; peroxisomal 2,4-dienoyl-CoA reductase	EC:1.3.1.34	Peroxisome	ko04146	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_43466-5.11 global RNA-seq network