Gene detail

Detailed information of Bpl_scaf_4236-0.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_4236-0.5	ATP SYNTHASE GAMMA-RELATED	Bpl_scaf_4236	23902	59752	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_4236-0.5

ATGGCTGATACAAACACGAATACACGGAGACGGGTAAAGTTGTACATGCTGAACGAAGAACGTCAGTGGGATGATCAAGGCACCGGGCATGTGTCGTCCATCTTCGTGGAAAGACTGAAGGGAATGTCACTCTTGGTCAGGTCTGAAACAGACGGTACAATTCTTTTGGAATCAAAGATACAGCCAGAAACATTATATCAAAAACAACAGGAAACATTGATTGTTTGGTCAGAGGCAGACAACTATGACTTGGCTTTAAGTTTTCAAGAACAGGCAGGTTGTGATGAGATATGGAAGAAAATTTGTCAGGTCCAAAATCGAGATCCCAATGTAAATATAACACAAGATATTGTTGATGACTTTGAAGATGAAAGAATTGAAGAAATACCTGATGCTGCTCCACCAATAGAACTTCCTCCCTGTGAGCTGAGTAAACTAGAAGAAATATGGACTATATTTACAGAATCATCTATCCTCTCCACACCAATACGCAAGGAGAAACTTTCATTAGCCATTGAAAAGGATGGCTTTATCAAAAAATTACTAGATCTGTTTCATATGTGTGAAGATTTAGAAAATATTGAAGGACTACATCATTTGTATGAGATATTCAAGAGTATATTTTTATTGAACAAAAATGAATTATTTGAAATAATGTTTGCAGAGGATACAATATTTGATGTGATTGGAGTTCTAGAATATCATCCCTCATCACAACAACCGGCCAAACATAGGGAATTCTTACGTAAAACTGCAAAGTTTAAAGAAGTAGTACCGATCACAAACAGTGAATTAAAAAACAAAATTCATCAGACATACAGAGTACAGTATATACAAGATGATGATGAAAAGTTCTTGTCAACATTGTTTACACAGCTGATTGATGATGAAACGGATGAGAATGTTAGGAGAGATTTAGTGCTATTTTTAAAAGAATTTTGTACATTTTCGCAGACTTTACAGCAACAAAATAGAGAATCATTTTACAAGACATTATCAACCCTTGGTGTTTTATCGGCTATTGAAGTTATTTTAGGACTTGATGATCCACAGATTAAGTCAGCTGCAATAGATATATTTTCATACATTGTGGAATTCAGTCCGTCCATGGTCAGAGAGTTTATCATGAAGGAAGGCCAAACACAAGATGATGATGATCTGCTTATCAACCTTGTTATAGATCAAATGATTAATGACCCAGATCCTGAACTGGGAGGTGCAGTGCAGCTGATGGGAATACTGAGAATTCTGATTGATCCAGAAAACATGATACCTACAGCAAATAAAACAGAGAAATCAGAATTTCTAGTATTCTTTTACAAGCACAGCATGCATGTACTAACAGCCCCGTTATATGCCAACACATCAGATGGACGTCTAAGTAAAGGTGCCTTGAGATTTATGCGTAAAATTATAGGAATCAAGGATGACTTCTACTACAGATATATTATCAAAGGCTCCTTATTTAAACCTATTGTAGAGGCCTTCCTAGCTAATGGAAGTAGATATAATCTGTTAAACTCTGCAATCATAGAACTATTTGAATTCATCAAAATGATTTTAGGGAGGATTACTCCCTCATTGTTACGGAATCATCGGTATCGACGAGATCCAAGAACATTGGAGGAGGAAGAAGAGACGTGGTTTGACGAAGATGATGAAACAGAAGACATGGATTCTGTGATTCCTATCTCTGATGTATTACGTTCTAGTTTAGATGCTGATTTTGACCAAATTAACAGATATATAGGCAGTAGAAAAGGTAAAGACCAATCTCGTGAATCACCACCAAGGTTAATAAATAGGACAACATGTATAAATATCAATTTAAAAAACAATAGTCCGGTAACAAGTCCGGTCAATTCACCCACTGGGAGTCCAACAATACCGTGTCCAACACCAAACTCATCACCGAGTACACCAACAGACAAGGCATTGGCTGCTAAAAGGGCAGGGCTAGTGGGATTAGTAGATTATCCTGATGAGGACTCGGACGAAGAGGAGGAAGACTCTGAATCACCATCTGCAAAACGACCTCGACTGGCAACGTAG

Transcript

Bpl_scaf_4236-0.5

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04802	PP4R3	Phosphatase 4 regulatory subunit 3	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000697	Domain	WH1/EVH1 domain	Interproscan
IPR006887	Domain	Serine/threonine-protein phosphatase 4 regulatory subunit 3-like, central domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR051137	Family	Serine/threonine-protein phosphatase 4 regulatory subunit 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23318	ATP SYNTHASE GAMMA-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0030289	Cellular Component	protein phosphatase 4 complex	Interproscan
GO:0072542	Molecular Function	protein phosphatase activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17491	SMEK, PPP4R3; protein phosphatase 4 regulatory subunit 3	-	Glucagon signaling pathway	ko04922	PMID: 28812709
K17491	SMEK, PPP4R3; protein phosphatase 4 regulatory subunit 3	-	Longevity regulating pathway - worm	ko04212	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_4236-0.5 global RNA-seq network