Gene detail

Detailed information of Bpl_scaf_42036-0.1 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_42036-0.1	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	Bpl_scaf_42036	12057	78759	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_42036-0.1

ATGTTCTGTATTACACACATAATGTTTTCATCTTCAGATATTGATTGTATCAATGGACTAAATAATGGAATAAATTACAAAGGAACAGTAAATACAACAGCTACAGGAATTCCGTGTATTGTCTGGAATAATAAACACAATAATAATGTCAATTACCATGCTGACCATAACTACTGTAGAAATCCTGACAACTCCACAGTACCATGGTGTTATGCAGACATTACAGGTCATCCACGACGGAACTGTAATATAACATACTGTGGTTATTTATGCCCGGATATTAATCCTACTCCTCATATGGTAGCACCTAACAATCTGAAGGAGCATCGTACAGAGGAGAATGTCACATTCCTTTGTGCTGATGGATATATATTGTCTGGGTCTAAGTTTGCAATGTGTAGATATGTGGCAGGAGACAATATGGGATCTTGGGATAATAAGCAGCCATCGTGTATTGAAGATTGTAGAAGATCACTAACAGATCTACACTACAAGGGACACATTAACACTACAAGAAAGGGATATACATGTAAATATTGGAAAGACGGCACAAGATACACAAAGGAAGAAGACAATTATTGTAGAACTCCTAGTGGGGATGGAGATAATGGTGGAGGTCCATGGTGTTATACACCTATGGCGGATGCCATGTTTTCAACGAGAGATAAAGGTTCGAAAAAAGGTTCAAGCTCTGAAAGAAAGGGTAAAGGCTTGAAGAAAAATGTCTGTAAGGACGATAAAAAGGTTCCTTCGGAGGAAGGACCAACTGAAAGAGTAATAAAAGATGTAGAGAAGAGTTCCGGCGCGGCTCGTTCTCCGTCCTTATTGTCTCTGTCGGGACCAAAGACTGGCGTAGCCAGCTCTAGTAGAAAAGAACCTTCTTTGTCAGATGTCATGTCCTTATTATTGGACATTCAGAGAGAACAGACATTTCAGAAAAGAGACATGAGTACGTTACAAAATATGGTAAATGAAGTTTACTATGATGAGAGTTATATTCAAGAATATGTTGATTCAAATGAAGCACAAAATGTAGATGATAATAATAATCAAGATATTGACAATAATGTTGATTTAGAAGAGGTTGTTGAGCCTCCTTCTAAGAAACAAAAAACAAGTAATGATAGCAATGTTAAGGAAGCTGAAGCTTCTACGTCATCAGGTGGTTTTCAGAGAGGCCGAGGTGGTTTTGCTAGAGGCCGTGGTTGTTACAGAGGTGGCCGTGGAAATAGAGGTGGCCGTGGTAGAGGCGGTCAAGCTCAGTTAGCCATGTTGAGTGGTTCTAACCAGTCACAGAGAAATTCAACTACATATGGAAAGAGTGTATACCATTATGGCGAAACGGTCTCTGTTTCCTGTGGAAATGGATACCTCTTGAAAGGAGACATGATATTAACCTGTGAACAGTCAGGACAATGGAACGCCACTATGCCTACATGTGAAGAAATAACATGCACAAAAACATCATTACATTTAACTCCTAATGCTAATGTAAGAAATGACAAACAAAGTTATGACTTTAATGAGGAAGTGACAATGTCATGTAATACTGGCTTTAGTGGTAGAACTGTGACAGCACGGTGTACAGATGTAGATACATGGTCAGAAAATACATCGACTTGTACACGAATAACATGTACTCAAACATCATTACATTTAACTCGTAACGTTAATGTAACAAACGACAAACAAAGCTATGATTTTAATGATGAAGTGACCATGTCATGTACACATGGTTTCAGTGGTAGAACTGTGACAGCACAATGCACAGATGTAGACACATGGTCAGAAAAGAGTCCAACTTGTACAATCACCTCTTGTCCAAAATTGAATCTTACTCCACATATGTCACAACCAAGAAAACTGGAAGGATATCATCACAAAGATGAAGTACATTTTGGTTGTGACGTAGGATATTATTTAGTTGGATCTCCTGTACTAACTTGCCTTGCTAATGGTAAATGGAGCAGTCAGCAGCCAACATGTAAAGCTGCATCGTGTCCTGCTTTACCAAAGCTACCTCAATTACACCACATACCTGACGTAAGTGAATATATTTATAATGACACAGTAACATTTCAATGCGATGTAGGATTCTTGTTATCTGGGCCAGCTTTAGTTACTTGTACAACAAATAATCGCCAGTCACCTGTATACTGGAATGGTAAACAACCAAATTGTACCGAGGAATACAAAGGAGTGTCATATATGGTATTTGGTGTACTTGTAGCATTAATAATTGTCACTGTTGGAATCATCATAGGTCTGATGTGCTTTATAAGAATAAGATTAAAAGATTCGAGTAAACAGTATGAGGACATAAAGATTAACATGGGCTCAGCACCACACATTTCACTTAACCCTGCTCCAGATATTAGTAATATAGACTTCTTAGACGACAGTTTTGACATTCAAATGGCTGCTTTTAATGATCCAAAAATTGAGAAATTAATGAATGATATATCGGAGGAAAGTCTACAATTAATGGCAGAGCAAAATGAAAAATTTAATACTAGATTTGAGCAAAACAATGATCAAGAAAGAGTGATGTTTATGGAACAAAGGGAAAACATAAACACTAAAAGAAAAATGAATTATGCAGTTAAAACATTTGTACAATTTTTGTCAAATGTGAAGACTGAATTCCGCCAAATAAATGAGATACCACCAAATGAATTAGACAAATTTCTACAGGAATTTTATATAGGAATCAGGAAAGAGAGTAAGGGTGATATACCTGATATTGAAAGACAATATCAACCCAGCAGTTTACATGGATTCCAATCCATGATAAATCGGTTTTTAAGATTAAACAATTATGAATACGACCTTACAAAGTCTAAGGAATTTCAGCAGTCAAGAGACTGTCTTACTGCCAAAAAAAAACAACATTTAAAGGAAATGGGACTCGGCAATAGACCTAATGCTGCGGAGGCATTAGAACCAGAAGACGAGGAGGAGCTTTATAACTGTGGTGCATTTGGTACAGAAAATCCTGACAGCCTACTCAGTACTTTATGGTTTATGAATACTGTCCATTTTGTACTGAGGTATCTTTCTCACCGTCCAAATTTAGATCCAGAGATGGCTTTTTATTTAGGAGTGAACAGATTGAATAATGCGAAATCATGGTATAAGAACCAACCATTAGGAGAGAAAACATTACGGTCCCTTATGCAAAAAGCAGTAAAAAAATCAAATATTGACAAAAACAGAAAATTGACAAATCATTCCGGGCGAAAAACCACTGTTACCAGACTTCTTGATGAAGAAATACCCATTACATGTATTCAACAACACACAGGCCATAGGTCTGTGGAAAGTATAAACAATTATGCAAAAAACAGCTTGAAGACCCAACAAAAAATGTCTGCTATTTTATCAAGATCAAAAGCTGTTCCAACCAGTAGTGACATTACTAGTGTTAATGAAAATATTTCAAGTTCAACAGAGAATATCAATAATACTGCCAAAAAACCTGATATGCCATTCAATTTTCCTAACTTTTTCCCACCAGGATCAGTTATTCAAGGCGGAACATTTAACATGTATTTTGGCTCTCACGACAAGGAAAACCGTGCTTCAGAAACGCAAAAGGAAATTTGTGATTGA

Transcript

Bpl_scaf_42036-0.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00051	Kringle	Kringle domain	Domain	Interproscan
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF00589	Phage_integrase	Phage integrase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000001	Domain	Kringle	Interproscan
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR002104	Domain	Integrase, catalytic domain	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR018056	Conserved_site	Kringle, conserved site	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR038178	Homologous_superfamily	Kringle superfamily	Interproscan
IPR050350	Family	Complement & Cell Adhesion Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19325	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_42036-0.1 global RNA-seq network