Gene detail

Detailed information of Bpl_scaf_41833-2.19 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_41833-2.19	GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE	Bpl_scaf_41833	178117	190181	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_41833-2.19

ATGTTAACAGAGCCAGAAACAGAAAAAAGTAAACCGCAGTATTATAAACGAAAATTGCCAGAAACATGTATGCCATTTACATCTAATAAAGGGAAGGAACTCTTCAAGGAAGCTTTAACATCAGGTCATATGGATTGCTATTTTAAGCTAGCTGCACAGTTTCGTACTCAGGATGAACCAGCATATTCTGGGCTAAGCACTTTAGTTATGATATTAAATGCGTTAGAAATTGACCCCGGAATGGTCTGGAAAGGTCCATGGCGATGGTATCACGAAAACATGCTTGATTGTTGCGTTCCCGTAAAAGTAGTGGAACAGGAAGGCATTACTTTTGGTCAGTTTATATGTTTGGCAGAATGCAATGGTTTAGAAACTTTGTCGAAGTGTGTCAACGATGAAGTCTCAATAGAATCATTCCGTGATATTATCGTTCGTTACACAAAACAAGATGAATCTTTAATCACATTGTCATATTCCCGAGAAGTTCTTAGTCAAACTGGAGATGGACATTTTTCTCCGGTTGGTGGTTATCATTCTGGAACAGATCTCGTACTGATAATGGATACAGCTAGATTTAAATACCCGCCTCACTGGGTGCCTCTGTCGTTGTTGTTTGAAGCCATGAAAGCGACAGATAAATCTACAGGAAAACCTAGAGGATATGTAGTACTGAAAAGGAAACAAAGATGTCAAACTCTTCTTTTATTTCGCATTTCCGATTCATTTGGTGTTACTATGAAGAATGCTTGTCGCGAAAATATTGGAGTATTCTTAAACAGATGGAAATCTTGGTTGTCTCAAAGTATCGACACAAATCATACGATTGAAGAGGTATCTAAAGAGGCTGTTAATTTTCTTCTGAGATCTTCCCATGACGTTCCAGCTGGACAATATATCTTCTCCACACAACTTGATATACAGTGTCTTCATGGCGTATCGAAAGAACATTTCTGTGATATCGAAATGTTAATAGATGAACTGGAGAAAAACGAGATGTTTGAAATTGTTAGTGATTTTTTAAGTAAAGGACAACCGAATTGTAATTTGAAAATGTTTGGCCAATCATCCATATGTATCTCCATATCCGGTGATGACTCGACCACTGAAGCATCATCTAAAAAACGATGCCTGCATTGCCTACAACCAGCACATTTCATTTCGCTGTTTCTACTGTCCTGGCCATACCAAACCTTGCCAGAATTGAAATGTGAGACCAATGGATACATTCTCAACTCCAATATTTGTACAATCGTGGCGTCTAGCAATGCGAAATATCTAGGTATTGAAGTGCGAATGTTAAGGAAACAGTTTAAGGTGTTGCTTAGTGCACTGATTATGTTAACAAAACCAAAGCCAGAAACAGATAAAAGTACACCGCAGTATTATAAACGAAAATTGCCAGAATTATGTATACCATTTACATCTAATGAAGGGAAGGAACTCTTCAAGGAAGCTTTAACATCCGGTCATATGGATTGCTATTTTAAGCTAGCTGCACAGTTTCGTACTCAGGATGAACCAGCATATTGTGGGTTAAGTACTTTAGTGATGGTATTAAATGCGCTAGAAATTGATCCTGGAATTGTTTGGAAAAGTCCATGGCGATGGTACCACGAAAATATGCTTGATTCTTGTGTTCCCGTAAAAGTAATTGAACAAGAAGGCATTACTTTTGGTCAGTTTATACGTTTGGCAGAATGCAATGGCTTAGAAACTTTGTCGAAGTGTGCCGACGATGAAGTCTCAATAGAATCGTTCCGTGAAATTATCGTTCGTTACACAAAACAAGATGAAGCTTTAATCGCGTTGTCATATTCTCGAAAAGTTCTTAGTCAAACAGGAGATGGACATTTTTCTCCGGTTGGTGGTTATCATCCTGGACAAGATCTGGTACTGATTATGGATACAGCTAGATTTAAATATCCGCCACACTGGGTTCCTCTGTCCTTGTTGTTTGAAGCCATGAAAGCGACAGATCCATCTACAGGTATACTAAAAAAAATAAAACTAGTGTGA

Transcript

Bpl_scaf_41833-2.19

GTTATTGCAGCTGATTATGTTAACAGAGCCAGAAACAGAAAAAAGTAAACCGCAGTATTATAAACGAAAATTGCCAGAAACATGTATGCCATTTACATCTAATAAAGGGAAGGAACTCTTCAAGGAAGCTTTAACATCAGGTCATATGGATTGCTATTTTAAGCTAGCTGCACAGTTTCGTACTCAGGATGAACCAGCATATTCTGGGCTAAGCACTTTAGTTATGATATTAAATGCGTTAGAAATTGACCCCGGAATGGTCTGGAAAGGTCCATGGCGATGGTATCACGAAAACATGCTTGATTGTTGCGTTCCCGTAAAAGTAGTGGAACAGGAAGGCATTACTTTTGGTCAGTTTATATGTTTGGCAGAATGCAATGGTTTAGAAACTTTGTCGAAGTGTGTCAACGATGAAGTCTCAATAGAATCATTCCGTGATATTATCGTTCGTTACACAAAACAAGATGAATCTTTAATCACATTGTCATATTCCCGAGAAGTTCTTAGTCAAACTGGAGATGGACATTTTTCTCCGGTTGGTGGTTATCATTCTGGAACAGATCTCGTACTGATAATGGATACAGCTAGATTTAAATACCCGCCTCACTGGGTGCCTCTGTCGTTGTTGTTTGAAGCCATGAAAGCGACAGATAAATCTACAGGAAAACCTAGAGGATATGTAGTACTGAAAAGGAAACAAAGATGTCAAACTCTTCTTTTATTTCGCATTTCCGATTCATTTGGTGTTACTATGAAGAATGCTTGTCGCGAAAATATTGGAGTATTCTTAAACAGATGGAAATCTTGGTTGTCTCAAAGTATCGACACAAATCATACGATTGAAGAGGTATCTAAAGAGGCTGTTAATTTTCTTCTGAGATCTTCCCATGACGTTCCAGCTGGACAATATATCTTCTCCACACAACTTGATATACAGTGTCTTCATGGCGTATCGAAAGAACATTTCTGTGATATCGAAATGTTAATAGATGAACTGGAGAAAAACGAGATGTTTGAAATTGTTAGTGATTTTTTAAGTAAAGGACAACCGAATTGTAATTTGAAAATGTTTGGCCAATCATCCATATGTATCTCCATATCCGGTGATGACTCGACCACTGAAGCATCATCTAAAAAACGATGCCTGCATTGCCTACAACCAGCACATTTCATTTCGCTGTTTCTACTGTCCTGGCCATACCAAACCTTGCCAGAATTGAAATGTGAGACCAATGGATACATTCTCAACTCCAATATTTGTACAATCGTGGCGTCTAGCAATGCGAAATATCTAGGTATTGAAGTGCGAATGTTAAGGAAACAGTTTAAGGTGTTGCTTAGTGCACTGATTATGTTAACAAAACCAAAGCCAGAAACAGATAAAAGTACACCGCAGTATTATAAACGAAAATTGCCAGAATTATGTATACCATTTACATCTAATGAAGGGAAGGAACTCTTCAAGGAAGCTTTAACATCCGGTCATATGGATTGCTATTTTAAGCTAGCTGCACAGTTTCGTACTCAGGATGAACCAGCATATTGTGGGTTAAGTACTTTAGTGATGGTATTAAATGCGCTAGAAATTGATCCTGGAATTGTTTGGAAAAGTCCATGGCGATGGTACCACGAAAATATGCTTGATTCTTGTGTTCCCGTAAAAGTAATTGAACAAGAAGGCATTACTTTTGGTCAGTTTATACGTTTGGCAGAATGCAATGGCTTAGAAACTTTGTCGAAGTGTGCCGACGATGAAGTCTCAATAGAATCGTTCCGTGAAATTATCGTTCGTTACACAAAACAAGATGAAGCTTTAATCGCGTTGTCATATTCTCGAAAAGTTCTTAGTCAAACAGGAGATGGACATTTTTCTCCGGTTGGTGGTTATCATCCTGGACAAGATCTGGTACTGATTATGGATACAGCTAGATTTAAATATCCGCCACACTGGGTTCCTCTGTCCTTGTTGTTTGAAGCCATGAAAGCGACAGATCCATCTACAGGTATACTAAAAAAAATAAAACTAGTGTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05023	Phytochelatin	Phytochelatin synthase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007719	Domain	Phytochelatin synthase, N-terminal catalytic domain	Interproscan
IPR038156	Homologous_superfamily	Phytochelatin synthase, N-terminal domain superfamily	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR040409	Family	Phytochelatin synthase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33447	GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0010038	Biological Process	response to metal ion	Interproscan
GO:0010273	Biological Process	detoxification of copper ion	Interproscan
GO:0016756	Molecular Function	glutathione gamma-glutamylcysteinyltransferase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0046938	Biological Process	phytochelatin biosynthetic process	Interproscan
GO:0098849	Biological Process	cellular detoxification of cadmium ion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05941	E2.3.2.15; glutathione gamma-glutamylcysteinyltransferase	EC:2.3.2.15	Non-coding RNAs	ko03100	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_41833-2.19 global RNA-seq network