Detailed information of Bpl_scaf_41649-1.10 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_41649-1.10TRANSCRIPTION FACTOR 7 FAMILY MEMBERBpl_scaf_41649173186196765+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHMG

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR024940FamilyTranscription factor TCF/LEFInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10373TRANSCRIPTION FACTOR 7 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000790Cellular ComponentchromatinInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016055Biological ProcessWnt signaling pathwayInterproscan
GO:0060070Biological Processcanonical Wnt signaling pathwayInterproscan
GO:1990907Cellular Componentbeta-catenin-TCF complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04491TCF7L2; transcription factor 7-like 2-Wnt signaling pathway ko04310PMID: 28812709
Hippo signaling pathway ko04390PMID: 28812709
Adherens junction ko04520PMID: 28812709
Melanogenesis ko04916PMID: 28812709
Pathways in cancer ko05200PMID: 28812709
Colorectal cancer ko05210PMID: 28812709
Thyroid cancer ko05216PMID: 28812709
Acute myeloid leukemia ko05221PMID: 28812709
Basal cell carcinoma ko05217PMID: 28812709
Prostate cancer ko05215PMID: 28812709
Endometrial cancer ko05213PMID: 28812709
Breast cancer ko05224PMID: 28812709
Arrhythmogenic right ventricular cardiomyopathy (ARVC) ko05412PMID: 28812709
Human papillomavirus infection ko05165PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_41649-1.10 global RNA-seq network
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