Gene detail

Detailed information of Bpl_scaf_41649-0.4 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_41649-0.4	MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED	Bpl_scaf_41649	6520	29341	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_41649-0.4

GGACATGTCCGTAGAGGGAGATAACCAAAGGTTGTCTGCTAGATGTAAAAATCTTGTGAAAGTACAATTACAACTTTATCGACTCTGGATGAATGACATTGCCACCCTCTGCAACCAAGCATTTCTATAGATATACTTAGTAATGATGGCATGATACACTAAAAGTTTTTCTAAAAGCAAAAGAAATAAATTCTTCTTGAAATATTGGACGTGCAAACGCCAACGTGTGGACGTGACTTCAGAAGTTCAGTCAAAGTTAAGTTCCTGCTTCATTGATTGCATTATTTTTGTAGTTAATGTCCATCATGTCAGTTGATAAGACGAAAAGAATCGGAAAATGGTATTTTGGAGGAATTGCAAGTGCAATGGCGGCTTGCTGCACCCACCCACTTGACCTGATGAAGGTTCATTTACAAACACAACAAACCAAAGTAAAAACATCTAAGTTGATAGTACAGCTTTTCAAGAGTGATGGCATCTTAGGATTTTACAATGGTCTATCAGCATCTGTAACAAGACAGCTAACATATTCTATGACTAGATTTGCTATCTATGAAACAGTCAAGAAAAACCTAACCACTGATGGAAATGTGATGCCACTCTATCAGAAAGTAGGAACAGCAGCAATTGCTGGGGCGACAGGAGGGTTTATTGGAACACCACCTGATCTAGTCAATGTTAGAATGCAAAATGATGTCAAGTTGCCTAAAGAACAGAGAAGAAACTACAAACATGCTATAGATGGTTTATTCAGAGTTTTTAAAGAAGAAGGTTTTGTTAAAATGTATTCAGGTGCATCCATGGCCAGTTCTAGGGCTGTACTAGTCACAGTAGGACAGCTTGCAGGGTATGACCAAATTAAACAGATGTTATTGAAGACTGGATATTTTAAAGACAACACTATTACGCATCTAACATGTAGTACATTGGCTGGATGTCTGGCCACCATGTTGACTATGCCATTGGATGTAATGAAAACAAGAATGATGAATAATCCATATCCTAGTATTATGGCATGTGCAGTAGATATAGCAAAGACTGGGCCTCTAGGATTTTTTAAGGGTTTTATACCAGCATTTGTGAGACTAGGACCACACACGGTGTTCACCTTCCTATTCTTTGAGCAGATTAGAATGAATTTTGGTGATGACGTACAATAACCTTGTAAAAGTGGAATATAGCAATTTTGAAAACTGCTATTTTTATGCAGGAATATACCAAAGTCTTATTACATTTTTGTATATTGCAATAATTTTGTGATAACTGGAGTATTTTATTACAATATAATGCAATTTCTTTCATTCCAATTACAAGTGCCATAATATCTTTTTTTATAGGAATGCTATGTAATATTTATTTAAGAATATTTCTCATATAATTTTACTAAATATTTGTATCATGTTAAACAAATTGAAAGGACAAACCACTGAAACCATGGAATTTTTCAATTTTAAAACCTTGTATGGTTCAATGTCCTCTATGGAACCTTTTTTTGACAGAGGTGAGCCGAATGTGAAAATTTTGTCTTAGAATCACCAAGATTGTATGTAGTTTTAATGAAGGTATGTTATAAATCAATTTAATTGAATTAATTTCCAAAACATGCAACTTTTAAATTTGATAAAGTGTTTGATTTCTTTTTTGTTCTTTCTTTGTATTTATGGAAGTATTTTAGCAGAAAAGGCAAAATGAAAGTTATTAATAATAGCTGATAATTGTAAACAAATGCTATTGTTGGGAGAATTTCATTAGAATGGGAATAACCGTAATGTTGTTGACATAAATAGTCAGTCTTACTGTCAGAAATATCTGTTTACGTCAGCAATACTTCAAATACAATTCAGTTATTTCCTATTTGTTTCCCTCTCTGTTCAGTATTAATGTATTTAACAAGATGTATCATGTTACTATCATGCAGTGTATAGGTTTGGGATTTGGTAGGTTATTATTTTTCACTGGTGACTTTTTTAGTAATTAAAATGCAATTTTAGATTTTTATGAAAATATTATATTAACCAGTCTTCATATTCAAAACAGACTTCTGTCAGAAACAGTGTCTGATTTTTAAACCCAACTGTGTGGCAATTTTAATTTGGTAATGTTTATATCATTGTGTTTATAATATATATATTTCGTGGGGTGCAGCTAGCTTGCATGTGTGTTTGTTTTTTGGTTCCGAAAATTGTTTTAAATGTTATCAATAAGATTGAATTCTATATGAGTTTTGAATGTCTATAGATATATGTATATAATAGTCATCGTACATTACCTGGATATCTTAAAATTTGATGTTACTATTTTTCATTATTACTTTTAAATTGACATACTGGGTACTTTATGTTAATTATTATCAGATAATTTTTTTTTAGAATCGACATGTTTTATTATTACAAATTGTATATGATTGTGGGGGCCATCATGGCTGTGGTTGTTTGGTAGTTGGATTTACAACTACCTATACAATCAGTGCCTATCACCACTGATTTTGTGAGTTCGAATCTTGATTAGGGGGAGGTGTACAACATTATGTGATAAAGTTTGTCAGTGACTTGCGACATGTCAGTGGTTTTCTCCTGATCCTCTGGTTTCCTCCACCAATAAAACTGACAACCATGCTATAACTGAAATATTGTTGAAAGTGGTGTTCAACTCCATCAAACAAACAAACAAATAAACAGCATTAATGACATGATTATAGAATTATGTTTAGATATGAAAACATTGGTCAATTTTTATGCGACTGATGTCATCAGTTTATTTATTATTTTATGCAAAAAAATACAGTCAGAAACTGACTTATAACCAGGTACTGTATAGTTGGGAGTTATACGAAAGTGCGGATTGGCATATCAAAAGTGCAGATTTATTAGTTTCAAAAGCATAGATTTACCTATACCTGTTCCGCTAGCCAGACATTACTGTCTGTTGCTCTCTGTTCATTATGGGGAGATGGAAGTAGGATTTTGAGAAGTTTTTTTTTTTATTTAGTATGAAAAATAACACTACAAGTATGCAATCTTATGTACATGTAAAAAACACTGTGTATAAACAGAGATTTAGACAAAACAGGATATACTTTGGGTCTTTTTCTATACAGTGATTGTGCTATTGACCTCATGCCATTATGAATTAAATTCTTACACATGTTCATCAAATTTAAGTCAGTGAACAATAATCTGCACTTTTGATGACATCTACTTGCTAGCTTTTCATACACCACTGAAAGTTAAAATCTGTGCTTTTGTGAAATGCCTGTATAGTTGAATTTTATTTTTAATCAATATCCTTTCTATATTATTAATGTGTGGGGGGACACTAGTTATGATTTTCAAAAAAGAATCTTTAAAGTCAAACGTTGATTTTAAAATATTGATGCATTTTATACGGAAGAAAACTGCATAATCTACATTTTTTACCAGAGTTTTGATACCCACTTCTGGTACTTGTTATTATTTTTAGCTGACATTTTTTTTATCCACATATATTTCATAATTTGTATATTTTATTTTATTATTCAAGAATTTATTTTAAAGTTCAAACTATGAGTTTGATAAAAAAAAAAAAAAACATTCCTAATTTACAAGGGTATTTTATTAATGTAAATATTGTGAAGGAATATTAAAATTAACAAATATATTGTAGTATTTCAATGTTTTAATACCATATATAGGAAGGCAGTGTAAACACATTTTGTTGTATTGATCTTTTCTTGATCTGGATAAAAGATTTGTTAATGGAAGTATCATGCCATTATATTCTTTTTTTGTGTATTATTGGGTACAAACAAGAATTTTGCCTGTGTCAAGTCAGTTGTTGAACCGTTTTTTTAAATACAAAATTGAGTAACTTATTGATAAAACTGCTAAAAAATCCTGTTTAAAATTGTATAACACTTTTGTTATATATTTTATTTTTTATATTTAGATGATATTTTGATTTATGGGTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002067	Family	Mitochondrial carrier protein	Interproscan
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR050391	Family	Mitochondrial Metabolite Transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45618	MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008272	Biological Process	obsolete sulfate transport	Interproscan
GO:0015116	Molecular Function	sulfate transmembrane transporter activity	Interproscan
GO:0015117	Molecular Function	thiosulfate transmembrane transporter activity	Interproscan
GO:0015131	Molecular Function	oxaloacetate transmembrane transporter activity	Interproscan
GO:0015140	Molecular Function	malate transmembrane transporter activity	Interproscan
GO:0015141	Molecular Function	succinate transmembrane transporter activity	Interproscan
GO:0015297	Molecular Function	antiporter activity	Interproscan
GO:0015709	Biological Process	thiosulfate transport	Interproscan
GO:0015729	Biological Process	oxaloacetate transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0035435	Biological Process	phosphate ion transmembrane transport	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0071422	Biological Process	succinate transmembrane transport	Interproscan
GO:0071423	Biological Process	malate transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13577	SLC25A10, DIC; solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10	-	Proximal tubule bicarbonate reclamation	ko04964	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_41649-0.4 global RNA-seq network