Detailed information of Bpl_scaf_41560-0.8 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_41560-0.8ATP-CITRATE SYNTHASEBpl_scaf_4156098331165934-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00285Citrate_syntCitrate synthase, C-terminal domainDomainInterproscan
PF00549Ligase_CoACoA-ligaseDomainInterproscan
PF02629CoA_bindingCoA binding domainDomainInterproscan
PF16114Citrate_bindATP citrate lyase citrate-bindingDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002020FamilyCitrate synthaseInterproscan
IPR003781DomainCoA-bindingInterproscan
IPR005811DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan
IPR016102Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR016143Homologous_superfamilyCitrate synthase-like, small alpha subdomainInterproscan
IPR017440Active_siteATP-citrate lyase/succinyl-CoA ligase, active siteInterproscan
IPR017866Conserved_siteSuccinyl-CoA synthetase, beta subunit, conserved siteInterproscan
IPR032263DomainATP-citrate synthase, citrate-binding domainInterproscan
IPR033847Conserved_siteATP-citrate lyase/succinyl-CoA ligase, conserved siteInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR036969Homologous_superfamilyCitrate synthase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23118ATP-CITRATE SYNTHASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003878Molecular FunctionATP citrate synthase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006085Biological Processacetyl-CoA biosynthetic processInterproscan
GO:0006633Biological Processfatty acid biosynthetic processInterproscan
GO:0046912Molecular Functionacyltransferase activity, acyl groups converted into alkyl on transferInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01648ACLY; ATP citrate (pro-S)-lyaseEC:2.3.3.8
Citrate cycle (TCA cycle) ko00020PMID: 28812709
Carbon fixation pathways in prokaryotes ko00720PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_41560-0.8 global RNA-seq network
TOP