Gene detail

Detailed information of Bpl_scaf_41549-2.14 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_41549-2.14	HECT DOMAIN UBIQUITIN-PROTEIN LIGASE	Bpl_scaf_41549	146852	194892	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_41549-2.14

ATGATCCACTCACAGACCATGGCCACACCTACACATGGTGTGACTGAGTTGGCTGACATAGAAGATGATTATATTAATTCTTTAGACACAATACCAGATACTGTAAAGGATAAACTAAAAACAGATGTCATTTTTGCTAGAGAAAAGAAAAGAATGAACCTATGGCTAGCTTTAGCTTTTCCAGATTCTACAATTAAAAGCTTAAATAAGATGGGGATAAATTCATTGGCTGCACTCAGTAATCTTACAGAGGAAGATATCCAAAAAGTAGTCGGTGATGATATCATAATTTATACAAAATTGTTGAAGGCCGCAAGAGATGTTAAAACTGCTGATGTCAACTTAAAAGTCTTGGAATATGGTTCTTCAAGAGGATTTGACTTTTGGATCAGAGTATTGTTGATATTTGTGACAATAGCAATTGGAGGAACTATCATCAGCTGTATAATGGTAGCAGATTGTATAGGAAGAGCTATAAATAGAATACCAGTACCCACCGGTGGAGAATGGGGGAGACATCAAGTCCGTCCACAGTTACCAACCATTCCACAACAGACAAACAATAACAAAGGATGGTTGTGGAACTGGTTTGTTGGTTCACATGTGTCCGCACAGAATTGTGGAGTAGTGTGGGGTTGGCAGGAGCCACAAATTGTTGGGAACACAATGTCATTTGTTGTGCAGTTACACCAGAAGAATGGAAAACCGTATAAAATAATTGATTCGAGAATCGTACATGTGGAGATTCTACATAAGGGAGAGAAAATGTCGTGTACTAAGCAGTTAGATAAAGACAATTCTAATAGTGTCTCTATTTCATTTACTGTTCATAAATCAGGAACTTATAAAATACATGTGATGGTGAATGGTAAACACATCAAAGGGAGTCCATTCATAAAAGCATTTGAAGCAGATTCAATTGATGCCAGTAAGACAGGGTTCACTAATTATTGCTCAACAATAGTATGTACTGTTGGTCAGTCTTATCCACTGGTTATAGAGACTAAAGACTGTTATGATAATCCAGCCATGTTTAAATCAGATCATAAAAACTACTTTAAAATCAAAGTCACAGAAACTGAGAGCAATGTAAGGTATATACCTACTACACAAATAATACACAATGCTGACAGCAAACAACTAACAATGCATATAAAGATGGAGGTGGAAGGTTGTTACCAGGCTGCTGTGTCATATGGTGATATCAAACTGAAGAACGGTGATTTTAATATTCTGGTCATAAGTGATGAAGATTTAGAAGTTGTAAATAGAACAACTACAAAGAAAAGACATAATATATGGTATGAAGCACGGCTGCTCACAGACAATGCTGACTCTACTGAGAAAGCAAAAAGAGTTTATGTATATATATCTCCTAAGCAATTGACAATTAAAGAATATTTTTTTAAAATAATTGGTAAAAAGCTTCACACATGGCGTGTATGTCCTTCAACTAAGTTTTCGTTCACTGGTTACAACAATAGATATGATGCTCCAGTAATGAAGATCTTTGGATGTTCACAACTTCCTGTGATGTTAGCTACAAAAGATAGGAATGTCATAGCTGCTACCTTTACAAACTTTCTACTGAGAAACATAGGTGGGTCAGAAACATTCCAAGACAAACGACAGTTCTTCTTCCAGGAAGTAAAAAAATCATCTAAGAAAGGCAATGTCAGCCTAAAAATAGATCGAGCAAATTTACTTCAAAGTTCATATAAAGCTTCAAAAAGTTTATATTCATCTGACTGGTTTAAAACTTTTAATATAGAATTTGTTAATGAATTAGGTTTAGACTGGGGAGGATTAAGACGAGAATGGATAGATGTATTATGTACAGAATTATTTGACCCTGACAAGTCAGGACTATTTACTAGGTTTACAGATAACCCTCAGGGATTAGTTCATCCACTACACAGTGCTGGTGTTAAATTAAAGTATTATGAGTTAGCTGGAAAAATTGTTGGTAAATGTTTACTGGACTCTTCTACTGGAAGTTCTTCATGTCTTCTCGTCAAAGCCAATTTTTCTAGATCCTTCCTTGCTCAAGTAATTGGATTACAAGTAAATTATAAGTATTTTGAGACGGATGATCCAGAGTTATATAAAACTAAGATAAAGTTTATAGAAGATAACAGTATAGAAGATATGGAACTAAGATTTGTAGAAGAGGAATACTCAGATGGTCAGCTTGTTAGGACAGTTGATCTTGTTCCAAATGGATCAAAGATGGAAGTGACCAACGAAAACAAAATTTATTACCTAAACAGCCTAGCTCAGTATAAACTTGTCACCTGTGTTAAAGAGGAAGTAGAATATTTTCTCAAGGGACTTAACTCTATCATTTCTGATAATCTGCTTAGTATATTTGATGAAAATGAACTTGAGCTTTTAATGTGTGGAACAGATAATTACAGTTTTACAGATTTTAAAAACCATGCAATAGTATCAGGAGAATTTATAGGTACAAAGTTTCTAGAGTGGTTTTGGGCTATTGTTGCCAGTTTTACTGATGAACAAATGGCCAGATTGTTACAGTTTACAACAGGCAGCTCACAGCTACCACCTGGAGGATTTAATTACTTAGATCCTAAATTTACAATATCATTTACCTCATATTCTACAAACAGTTTACCCACAGCTCATACTTGTTTCAACCAACTTTGTCTCCCATCATACACAACCATGGAACAGATGCACAAATGTATGATGACAGCTATTAATGAAGGATTTCAAGGTTTTGGATTTGTATGA

Transcript

Bpl_scaf_41549-2.14

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569	Domain	HECT domain	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR050409	Family	E3 ubiquitin-protein ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11254	HECT DOMAIN UBIQUITIN-PROTEIN LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0043066	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_41549-2.14 global RNA-seq network