Detailed information of Bpl_scaf_41288-2.3 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_41288-2.3SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGENBpl_scaf_41288230186248302+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05889SepSecSO-phosphoseryl-tRNA(Sec) selenium transferase, SepSecSDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR008829FamilySepSecS/SepCysS familyInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR019872FamilyO-phosphoseryl-tRNA(Sec) selenium transferaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12944SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGENInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0001717Biological Processconversion of seryl-tRNAsec to selenocys-tRNAsecInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0098621Molecular FunctionO-phosphoseryl-tRNA(Sec) selenium transferase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03341SEPSECS; O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthaseEC:2.9.1.2
Selenocompound metabolism ko00450PMID: 28812709
Aminoacyl-tRNA biosynthesis ko00970PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_41288-2.3 global RNA-seq network
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