Detailed information of Bpl_scaf_41252-0.3 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_41252-0.3VISUAL SYSTEM HOMEOBOX 2Bpl_scaf_412523204447299+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR003654DomainOAR domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR023339DomainCVC domainInterproscan
IPR052294FamilyVisual system homeobox transcriptional regulatorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46892VISUAL SYSTEM HOMEOBOX 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:1990837Molecular Functionsequence-specific double-stranded DNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09336VSX2, CHX10; visual system homeobox protein 2-Transcription factorsko03000PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_41252-0.3 global RNA-seq network
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