Detailed information of Bpl_scaf_41128-3.8 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_41128-3.8NUCLEAR FACTOR NF-KAPPA-B PROTEINBpl_scaf_41128322350332484-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyRHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00554RHD_DNA_bindRel homology DNA-binding domainDomainInterproscan
PF16179RHD_dimerRel homology dimerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000451FamilyNF-kappa-B/DorsalInterproscan
IPR002909DomainIPT domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR011539DomainRel homology domain, DNA-binding domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR032397DomainRel homology dimerisation domainInterproscan
IPR033926DomainNFkappaB IPT domainInterproscan
IPR037059Homologous_superfamilyRel homology domain (RHD), DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24169NUCLEAR FACTOR NF-KAPPA-B PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02580NFKB1; nuclear factor NF-kappa-B p105 subunit-Ras signaling pathway ko04014PMID: 28812709
MAPK signaling pathway ko04010PMID: 28812709
NF-kappa B signaling pathway ko04064PMID: 28812709
TNF signaling pathway ko04668PMID: 28812709
HIF-1 signaling pathway ko04066PMID: 28812709
Sphingolipid signaling pathway ko04071PMID: 28812709
cAMP signaling pathway ko04024PMID: 28812709
PI3K-Akt signaling pathway ko04151PMID: 28812709
Apoptosis ko04210PMID: 28812709
Cellular senescence ko04218PMID: 28812709
Toll-like receptor signaling pathway ko04620PMID: 28812709
Toll and Imd signaling pathway ko04624PMID: 28812709
NOD-like receptor signaling pathway ko04621PMID: 28812709
RIG-I-like receptor signaling pathway ko04622PMID: 28812709
Cytosolic DNA-sensing pathway ko04623PMID: 28812709
T cell receptor signaling pathway ko04660PMID: 28812709
Th1 and Th2 cell differentiation ko04658PMID: 28812709
Th17 cell differentiation ko04659PMID: 28812709
IL-17 signaling pathway ko04657PMID: 28812709
B cell receptor signaling pathway ko04662PMID: 28812709
Chemokine signaling pathway ko04062PMID: 28812709
Adipocytokine signaling pathway ko04920PMID: 28812709
Prolactin signaling pathway ko04917PMID: 28812709
Neurotrophin signaling pathway ko04722PMID: 28812709
Osteoclast differentiation ko04380PMID: 28812709
Longevity regulating pathway - mammal ko04211PMID: 28812709
Pathways in cancer ko05200PMID: 28812709
Transcriptional misregulation in cancers ko05202PMID: 28812709
MicroRNAs in cancer ko05206PMID: 28812709
Viral carcinogenesis ko05203PMID: 28812709
Pancreatic cancer ko05212PMID: 28812709
Acute myeloid leukemia ko05221PMID: 28812709
Chronic myeloid leukemia ko05220PMID: 28812709
Prostate cancer ko05215PMID: 28812709
Small cell lung cancer ko05222PMID: 28812709
Inflammatiory bowel disease (IBD) ko05321PMID: 28812709
Cocaine addiction ko05030PMID: 28812709
Fluid shear stress and atherosclerosis ko05418PMID: 28812709
Non-alcoholic fatty liver disease (NAFLD) ko04932PMID: 28812709
Insulin resistance ko04931PMID: 28812709
AGE-RAGE signaling pathway in diabetic complications ko04933PMID: 28812709
Epithelial cell signaling in Helicobacter pylori infection ko05120PMID: 28812709
Salmonella infection ko05132PMID: 28812709
Shigellosis ko05131PMID: 28812709
Pertussis ko05133PMID: 28812709
Legionellosis ko05134PMID: 28812709
Tuberculosis ko05152PMID: 28812709
HTLV-I infection ko05166PMID: 28812709
Measles ko05162PMID: 28812709
Influenza A ko05164PMID: 28812709
Hepatitis B ko05161PMID: 28812709
Hepatitis C ko05160PMID: 28812709
Herpes simplex infection ko05168PMID: 28812709
Kaposi's sarcoma-associated herpesvirus infection ko05167PMID: 28812709
Epstein-Barr virus infection ko05169PMID: 28812709
Human papillomavirus infection ko05165PMID: 28812709
Amoebiasis ko05146PMID: 28812709
Toxoplasmosis ko05145PMID: 28812709
Leishmaniasis ko05140PMID: 28812709
Chagas disease (American trypanosomiasis) ko05142PMID: 28812709
Antifolate resistance ko01523PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_41128-3.8 global RNA-seq network
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