Detailed information of Bpl_scaf_41063-2.4 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_41063-2.4WD REPEAT-CONTAINING PROTEIN 43Bpl_scaf_41063180674214865-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04003Utp12Dip2/Utp12 FamilyFamilyInterproscan
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR007148DomainSmall-subunit processome, Utp12Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR052414FamilyU3 small nucleolar RNA-associated WD repeat-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR44267WD REPEAT-CONTAINING PROTEIN 43Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14546UTP5, WDR43; U3 small nucleolar RNA-associated protein 5-Ribosome biogenesis in eukaryotes ko03008PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_41063-2.4 global RNA-seq network
TOP