| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_40962-1.9 | ELONGATOR COMPLEX PROTEIN 1 | Bpl_scaf_40962 | 50243 | 111449 | - |
| CDS | |||||
| Bpl_scaf_40962-1.9 | |||||
| Transcript |
| Bpl_scaf_40962-1.9 |
| Protein |
| Bpl_scaf_40962-1.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04762 | IKI3 | IKI3 family | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006849 | Family | Elongator complex protein 1 | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12747 | ELONGATOR COMPLEX PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000049 | Molecular Function | tRNA binding | Interproscan |
| GO:0002098 | Biological Process | tRNA wobble uridine modification | Interproscan |
| GO:0002926 | Biological Process | tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0033588 | Cellular Component | elongator holoenzyme complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11373 | ELP1, IKI3, IKBKAP; elongator complex protein 1 | - | Transfer RNA biogenesis | ko03016 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_40962-1.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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