Gene detail

Detailed information of Bpl_scaf_40897-3.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_40897-3.7	TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER	Bpl_scaf_40897	275135	299496	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_40897-3.7

CGTCTTTAAATAAAGCTTTTGAACATTTGAATATATACCATATCATTTTCAGATTCTGATTGAAATTTCTATGCACAAGCTTTGATTTTGTGGTGTGCTGTATTGCCTATTGGCATGCGGTTGGAAGGACAAAGGAACAATACAGCTGTATCAATGATTCTATCGTATAATACAGTAATAAATAATACTAATTACTATGCTTCTATCAGTTTTTCGTTTTATGGTATGCACTTTTGAAGTTTTGTCTTTGACTTTGTCAGAGTTTGTCAAATTAACAAGGATAAAATTAAACAATAAACATACTCTAATTAATGGATATGTGTGCACGCGCTTTGAGTCTGTGGTGTCCACTTTCTTCTCTTCAGTTGTTTCAGCCATCTTTCAAGCAGAAAATGATCTTTAAATCAAAACACGTTGACAATGAAGCACAACAAGATTGGGTGGTTACTATGCCTTGCACGCAGGCGCGGTGATTTATTTCTAAGTTCCTGTTCAGAATATTAAAGTGCTGATTTATTATTTCACAAATCCACTCGCGACGACTACAAAACAACCGATGGGAAAGAAGGAGCAAGTGCGGAGATCTAATTTTACTTAGATTGATATTAAATGCAAAACAAACATAGTATAGCAACAGTATAGAACCTGTACGAATCGTCTCTGTTACCAAGGATGTATATACATCCTTACTGTTACGAAACGACCTGTCCTTTGAGACCAGAACATAGCCAAAACAAAAAAAGTAGCATGAACACCATAGTAAACACTTTCACGTGTAGATTGTAAACAAACTCTTCACAGAGCTAGTCAAACATGATATCCTCTAATAATGAAGTCCGCGTGTTCATTAGACAATATGAAAATGCAATCAATAACGCAAAAGATAATTCTGGTGTCCAAGATATGTTTTCAGACATTGAAAAGTTAATAACGTCAGAAGACGAATCTCCTCTCAAAACATTTAATTTTTCAAACTATGCTGAAGCAAGAATCTGTTTTTTACGTAACTTTTATATGTCTATGTTGAAGTTTTCACTTAAAAATGTTTCAGCCGACATTATAAGATATATATCAGGAGACGAATTAAACTGTTTTTTGAATTTCATATTCATGAATGGAAATCACAAGGACTGTTTCTTATCATTGGCTTGGGGAATTAATGAATTCAGGCCATCATACAAATTAAACAAGTGTGTATCGCTGTTGGAGAAGTTTTTACAGTCTCACCTATTGTGTAAGGTTATAAAACAGCAATGTTCAATAACCAGTCAAGTGGAACAGACTTATGAATGGGAGGCACTAATTAGCAATATAAGTAGTTTACCTGACAAAACAGCAAATAAATTACAAACAGAAAACAGTGAATTATTTTATCCAAAATCGTACATAACTCTTGTGACAGGAGACATTTTAAGTATATTACATGGAATTCATACATCAATACAAGCCAGTAAGGATGTCAGTCTAGAATTTATAAGTCGTCTTCTTGGAAAACTTTGCATAGCAGGATATTCTGATATTTTAATGGATGTTTTGGTGGGTTCTCTGGCTCCATTGGTTAAAGAAGACTTTATATGGTGTAGAATATCTGAAAGAATAATCACAGGTGTACCAGACAGATGTCTAGAAAGTGTTTTGTTGCCATTAATAGACAAGATACCATGGTATGGTCTAATGGATAAGTTTATAGGAGATAGTATTCTGAAGAAGCAAAAAATCCAGTATCTACTGTGTTCAAAACTTCTGCTGTTTAGACATACAGAAAAGGTTCATATTTTACAAAATGTCCTTGGATATTTAGGAACATCACACACTAGAAGACATTTGTTGATAAAGTCTTTTAAAGAACTGTTAAGTGTATGGGGAGACAGCAGTGCCATAAGACATACTTCACCAGAACAACATCTTTATCTTACTAGAGCATTATTTATATGTATGGGATATCTAACTGATACAGATAAACAGACTCATAAGGATGAACTAATACGACTAATTATGCCAGGAGTGGAAGCACATATAGGGAACTCAGATCATAACATCAGAAAACAAGGAATGGTATTAGCTGAGACCTTAGCATCAGTAGTAGATCCTAATGGACCAAAACTTAAGTTTGAGTATGAGAAAGGCAAAGAGACAGAAGCATTATTAGAGTTAATGTTACCACCCAGTGATCCTGGTATAGAACAGTTACAAAAGAAAATTGAGGAGATACAAATAGACCAGAAAAAGGAAGATCAACCAGGAGAGGTTAAGAAAGCAGAAACAACAGAGGGTACAAAAGAACAAATTGAAGTGGATTCTGATTTGGACAGTGATGATGATTTGGAACCATATGATATGTCAAATGATGTGAAGGTCACAAAGATAGCTACAGAGTTGACTAAAGTTCTATTACACCTTGGTGACAAGTATTCTACACCTGGTTTTATTCAATACAGATTTAAAGCAATGGTTGCCTTGGCAGTCTATGTTCCTGTACCGGTTGCAGATTACATTACAGGAGAATTCTATGATAGGAATTATAACCTGAGACAAAGAATGGATATCTTAGAGGTATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10193	Telomere_reg-2	Telomere length regulation protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019337	Domain	Telomere length regulation protein, conserved domain	Interproscan
IPR038528	Homologous_superfamily	TEL2, C-terminal domain superfamily	Interproscan
IPR051970	Family	Telomere Length Regulation TEL2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15830	TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0007004	Biological Process	telomere maintenance via telomerase	Interproscan
GO:0042162	Molecular Function	telomeric DNA binding	Interproscan
GO:0050821	Biological Process	protein stabilization	Interproscan
GO:0051879	Molecular Function	Hsp90 protein binding	Interproscan
GO:0070209	Cellular Component	obsolete ASTRA complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11137	TELO2, TEL2; telomere length regulation protein	-	Fanconi anemia pathway	ko03460	PMID: 28812709
K11137	TELO2, TEL2; telomere length regulation protein	-	mTOR signaling pathway	ko04150	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_40897-3.7 global RNA-seq network