| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_40896-0.37 | RAB FAMILY | Bpl_scaf_40896 | 29585 | 46414 | - |
| CDS | |||||
| Bpl_scaf_40896-0.37 | |||||
| Transcript |
| Bpl_scaf_40896-0.37 |
| Protein |
| Bpl_scaf_40896-0.37 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00071 | Ras | Ras family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001806 | Family | Small GTPase | Interproscan |
| IPR005225 | Domain | Small GTP-binding protein domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47981 | RAB FAMILY | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0005764 | Cellular Component | lysosome | Interproscan |
| GO:0005770 | Cellular Component | late endosome | Interproscan |
| GO:0008333 | Biological Process | endosome to lysosome transport | Interproscan |
| GO:0045335 | Cellular Component | phagocytic vesicle | Interproscan |
| GO:0090385 | Biological Process | phagosome-lysosome fusion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07897 | RAB7A; Ras-related protein Rab-7A | - | Endocytosis | ko04144 | PMID: 28812709 |
| Phagosome | ko04145 | PMID: 28812709 | |||
| Autophagy - animal | ko04140 | PMID: 28812709 | |||
| Autophagy - yeast | ko04138 | PMID: 28812709 | |||
| Mitophagy - animal | ko04137 | PMID: 28812709 | |||
| Salmonella infection | ko05132 | PMID: 28812709 | |||
| Tuberculosis | ko05152 | PMID: 28812709 | |||
| Amoebiasis | ko05146 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_40896-0.37 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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