Gene detail

Detailed information of Bpl_scaf_40887-0.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_40887-0.8	INTERLEUKIN-1 RECEPTOR FAMILY MEMBER	Bpl_scaf_40887	73184	82664	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_40887-0.8

AATCCGCGGCCCGTGTCACATATATATTTTTCATAACAGCTGCCAGTTGACTGTTATAATGGAGGGTTTAAATGTTTGGATCATTGTAACTTCAGCATTTATAGGCTATGTTGAAGCTGTTGTTGTTGTTAACGGTATACTAGGATCCACTGTGACTTTAAATTGTACGCTACAGGGAACCATTACATGGAGAGGACCACCTAAAGAACTTGACTACTCATGGAAAGATCAAAAGAGCGAAAATATTCCGAATTATTTACGGAATCGATTAAGTATTGTGGGAGATTTTCCGAATGGAAAATACAATCTTCAGATTCAACACCTAGAAGCAAGAGACCGTGGTGTTTATATTTGTGAACTAAGGGCTATGAGTGATAGATTTCGCTTAAAAGTTGTAGGCAATATAAGTGTTACCGTAAATAAAACCACATATGTCGGTAGAACTGGTGGTTCCACCACATTGGGTTGTTCAGTGAAGTCACGTTCAAAGGTTGTCAGCGTATTGTGGTATTTGAGGGGAATTCCAATCAAGATTCGTGCAGAGAAATACAGTGGGAGCACTCCTAAGTCTCCATCATTGAACATTCAAAATCTGGAAGCAAGTGATCTAGGACCTTACAAATGTTCTGCCACTAATAGAGCATCAATTACGGCAAACAGTACATCTACAACGTTAACACTGCATGATATAGACGAAGACGACAAACAAGCTGCTAATATCATAATCATATCGGTGTCAACTGCAGTTTGTCTAGTCTCGATTGTCATGGTTACAGTTGCTGTACTGAGAAAACACAAACCAATATTCATGTTGAAATTAGCATATCAATTCCAGAAGTTTGAAGATGATGATACTAAAACTTGGGACGCATTCGTTTCTTTTAAATCCGACGATGAAGACACCAAATTCGTATTTTCAAAACTTTATCCTAAATTAGAGAAAGAATTGGGTTTTAATCTGTGTATCCACCAAAAAGATTTCTTACCCGGAATAGCCATTACAACAAATATTATGGATGCCATACTCAATAGTCGCCGTACCATACTCATTATCAGTCAGAATTTTCTTAAAGGTGGGTATACAACCTTTGAGTATGAAGTGGCTCACGACGAAATGATTAAATCTAAGCATAAGATTATTCCCGTTTTACTTGATCATGTTGACAAGCTGAAAGGTGACATGGACGACACATTGAAATATATCATTCAGTCCGTTACATATATAACATGGCCGGGTGAAAACAGACGAAAGGCACAAGGCACATTTTGGAAACGACTTGAATTAGCAATGCCAAAGAAACACAAAGGATTACGTCGAGTTGGGGAACAGGACAGATTATTAGGAAATACATGTAGTTGCCATTTGAGTGAGTAATTATCCGGAGATTAAAGTGAAAATTCCCCAAAACCAGGAATAATGGGAATGCGTGAAATTAAATGGAGACTTTATTTTTTTTAACAAATACACATACTTTCTGTTAATTACACACTGTATACCCGTATATTATGTTAAAATGTTATGATTTAATATACATTTTTTGTGTACTTGTATCTGTCACATACTTGTATTATATTTTAGTGTCAGTGCAACTGCATGATACATTATCAAGCTGCACAACTGTTTTAATGGGGACAACTATTGACCCTTGGACCTTTCTTGTACTCGGCCAGGTAACTGCTAATTGCTTTCCCCAACAATAAATGACACACATGAAATAACAGACTGTTTATAGGTTGTGAGATACAGATATGTCTGCTTCATACCTTGACCTACACCTCGAAATTGACAGTGAGGGGCGATTAAGAACGAAACTTTACGAGAAAAGAGATGATTTTAATTTTCCCACTGTGAACTTTCCTTTTATATGTAGCAACATTCCAGCAGCATAAGCATATGGACTATTTATCTCTCAGATGATACGATATTCCAGAGCTTGTGGTTTCTATCAAGATTTCCTTGATAGAGGGTTGCTGCTAACAAGAAAGCTACTGAATCAATGGTTCCTCTTGGTAAAGTTGAAATCATCACTTCGAAAGTTTACGGTCGCCACCATGACTTGGTTGACCGCTATGGAATATTTATGTCACCAATGACCACGGATATGTTCCACTTGTCGTAAGCACTTCACGGTCCGTTCCTCATTAATTAATTATCACCGGATTTGTAACTAGATTAATACGATTGGTGAGAAAAGTGGAGCAGGAACTGCTTATCCTTCCGGAGCACCTGAGTTCACCCCCGGTTTTTAGTGAGGTTCATGTTACTCGATCTTTAGTTTTATGTGTATGTTTTGTAGATTGTTGTTTGTCCTTTTGTACTTTTTGTTTTGGCCAGTGTGTTGTCTGTTCTCCGATATACGGATTCAATTTGCTTCTTTGGTATCTTCAAACTCTTCTTGTCACATTTAAACAAAAACAAATCGGTCATAAACGACGACGGACACCAAGTGATCACACTACCTCACCTGACTCTTTGGGTCAGGTGAACTAAAACAAAACTCGTCGTTTAAGTCTTCCAATATTGATTTTCTTACATTATATACAAAATGGACATTTTCAGTTTTTTCAGAATTTCCTCATACTTCGCATGCAACTCACCTGCACTTACATATTTTACAAAAACGCTACAAAAATACTTATTTATCTACATAGCTTCTAATTTTACTTGGCAAGTAAAGTTCAAGTCTTGCAGAAAGCAATCTAATTAATATTAGGTGGGAATCCGTGAAATAAAGTGGGGACTCTTTTTTTTTATATACATATCACGTACTTTCTGTTAATTACACGCTGTATATATTGAGTTCAAATGTTATGACTTAACTTGTAACTTTTAGTGTCGGTTCAACAGCATGATACATTGTTAAGCTGCACAACTGTTTTAATGGATACAAATGTTTGACATTTCTTATACTCGGCCAGGTAACTGCTAAATTCTTGCCGCTACAGGTTGGTTGGCTGGTTTATGGTGCTTAGCGCCACTTTCAACAATATGTCGGCTATATCGTGGTGATCAGTGTTATTGGTGGAGGAAACCGGAGTACCCGGAGAAAACCACCGACATGTCGTAAGTTACTGGTAAACTTTATCATATAATGTTTGTATCGAACACACCTCACAACGTTAGTGGTGATACGCACTGGTTGCATAGGTAGTTTTAAATCCAGCTACCATGCGATCACGACTACGACGGTCCTTTCTTTAGCTACAAAAAAGACACAAATGAAATATAGACTTACATTGTATATGACATTTAGGTTGTAATCTAAAGGTTCAAAATAAAAATAAAAAGTCGCATATCTTACATTACGTATTATATACAAAATGGGCAAGTTCATTTTATAAGACTTTTTTTCCCATAAATTGCGTGCAACTCGGCTGCATTTACATATTGTACAAAGCCTTGAATCGCAGCTGCCAAGCCAAAAAAAAGAAGAGCAAGTTAGGAGATCTAATTTTGATTAGATTGTACGGAAGGGACTGTAATTTTAATTAGATTGTACGGAAGGGACTGTAATTTTGATTAGATTGTACGGAAGGGACTGTAATTTTGATTAGATTGCACGGAAGGGACTGTAATTTTGTTTTTAATGCATTAGCTACTAAATCATTCATTATTTAAGAAATAATCCATGGCATATTCATTTAACCATGAGCTGGGCCTTTATAATCAACTTTAGTCCCGAGCGACAACGAGGGGTTAAATTAACGATTATAAAGGCCCAGCCTATGGTTAAATGAATATAACACAATGGCTGCCATGGATTATTTCGATTCTAATAGGACAAATACGGTAATTTACTTGCAAAACGCCGCCTATACACACAGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01582	TIR	TIR domain	Family	Interproscan
PF07686	V-set	Immunoglobulin V-set domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000157	Domain	Toll/interleukin-1 receptor homology (TIR) domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013106	Domain	Immunoglobulin V-set domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR015621	Family	Interleukin-1 receptor family	Interproscan
IPR035897	Homologous_superfamily	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11890	INTERLEUKIN-1 RECEPTOR FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04723	IL1RAP; interleukin 1 receptor accessory protein	-	Cytokine-cytokine receptor interaction	ko04060	PMID: 28812709
			Th17 cell differentiation	ko04659	PMID: 28812709
			Inflammatory mediator regulation of TRP channels	ko04750	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_40887-0.8 global RNA-seq network