| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_40594-3.31 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER | Bpl_scaf_40594 | 419104 | 426061 | - |
| CDS | |||||
| Bpl_scaf_40594-3.31 | |||||
| Transcript |
| Bpl_scaf_40594-3.31 |
| Protein |
| Bpl_scaf_40594-3.31 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13307 | Helicase_C_2 | Helicase C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001945 | Family | RAD3/XPD family | Interproscan |
| IPR006555 | Domain | ATP-dependent helicase, C-terminal | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR045028 | Family | Helicase superfamily 1/2, DinG/Rad3-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11472 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003678 | Molecular Function | DNA helicase activity | Interproscan |
| GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006139 | Biological Process | nucleobase-containing compound metabolic process | Interproscan |
| GO:0006289 | Biological Process | nucleotide-excision repair | Interproscan |
| GO:0006366 | Biological Process | transcription by RNA polymerase II | Interproscan |
| GO:0016818 | Molecular Function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | Interproscan |
| GO:0045951 | Biological Process | positive regulation of mitotic recombination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10844 | ERCC2, XPD; DNA excision repair protein ERCC-2 | EC:3.6.4.12 | Basal transcription factors | ko03022 | PMID: 28812709 |
| Nucleotide excision repair | ko03420 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_40594-3.31 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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