Detailed information of Bpl_scaf_40582-2.2 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_40582-2.2DNA POLYMERASE CATALYTIC SUBUNITBpl_scaf_40582231734268053-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00136DNA_pol_BDNA polymerase family BFamilyInterproscan
PF03104DNA_pol_B_exo1DNA polymerase family B, exonuclease domainFamilyInterproscan
PF14260zf-C4polC4-type zinc-finger of DNA polymerase deltaDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006133DomainDNA-directed DNA polymerase, family B, exonuclease domainInterproscan
IPR006134DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan
IPR006172FamilyDNA-directed DNA polymerase, family BInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR017964Conserved_siteDNA-directed DNA polymerase, family B, conserved siteInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR025687DomainC4-type zinc-finger of DNA polymerase deltaInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050240FamilyDNA polymerase type-BInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10322DNA POLYMERASE CATALYTIC SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006287Biological Processbase-excision repair, gap-fillingInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0008296Molecular Function3'-5'-DNA exonuclease activityInterproscan
GO:0043625Cellular Componentdelta DNA polymerase complexInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02327POLD1; DNA polymerase delta subunit 1EC:2.7.7.7
Purine metabolism ko00230PMID: 28812709
Pyrimidine metabolism ko00240PMID: 28812709
DNA replication ko03030PMID: 28812709
Base excision repair ko03410PMID: 28812709
Nucleotide excision repair ko03420PMID: 28812709
Mismatch repair ko03430PMID: 28812709
Homologous recombination ko03440PMID: 28812709
HTLV-I infection ko05166PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_40582-2.2 global RNA-seq network
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