Detailed information of Bpl_scaf_40569-5.11 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_40569-5.11EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDBpl_scaf_40569539964552031+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01398JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan
PF13012MitMem_regMaintenance of mitochondrial structure and functionFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000555DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan
IPR024969DomainEIF3F/CSN6-like, C-terminalInterproscan
IPR033859FamilyCOP9 signalosome subunit 6Interproscan
IPR037518DomainMPN domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000338Biological Processprotein deneddylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008180Cellular ComponentCOP9 signalosomeInterproscan
GO:0008233Molecular Functionpeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12179COPS6, CSN6; COP9 signalosome complex subunit 6-Ubiquitin systemko04121PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_40569-5.11 global RNA-seq network
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