Gene detail

Detailed information of Bpl_scaf_40569-13.16 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_40569-13.16	UNCHARACTERIZED	Bpl_scaf_40569	1280939	1303179	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_40569-13.16

TGTTGAACAGGTTTCCCCAAGAACCAACCGGCCTCCAAGATGACATCAACCTTGACATTTCATAGGATTTCTAATTATTTATTTCGAAACAAAGCTTTCAGATTACTTAGACATAGACGATGCTATTCAAACTCATCAGAAAATTTGATAAAAAACTTAATGACAAAAATCAAAGCTACAGGTCCAGTCACTGTTGCAGAGTATATGAGGGAAGGTCTGACAAGTCCTACCGAGGGATATTATATGACGAGGGATGTCTTTGGACAAGAAGGGGATTTTATCACATCACCTGAGATCAGCCAGATGTTTGGAGAGATGATTGGTGTGTGGTTTGTAAATGAATGGATGAAGAATCAGTTAAAACCTATACAACTGATAGAATTAGGACCAGGGAGAGGTACATTAGCTGATGATATACTGAGAGTTTTTAAGAATTTCCCTGAAGTGAAAGATTCAGTATCATTACATATGGTAGAAGTGAGTCCAGCATTAGCCAGTATACAGATTGAAAAATTAACTGATGAAAAATTGACAAGTAAACAATCCTCAAGACTTACAGAGAATTATGATTCATATGGGACAGACAATACAAAGAAAGGCTCTGTTGATCCTTATTATCACTGTACAACTAAGTATGGTATATCTGCATCATGGTATAAAACTCTGAATGACGTACCTCCGCAGCCCTCATTTTATTTAGCTCATGAATTCTTTGATGCATTGCCAGTTTGTAAATTTCAGAAAACTTCAGATAAAGGTTGGTGTGAAGTTATGGTGGATATTAATCCAGATAAACAGTCGTCTAACCAGTTCAGATTTGTATTGTCTCCAGGGGCAACACCTAATTCTACTGGATACTTACGGCACATACATCCTAATGATAAAAGAGACCACATTGAAGTAGCACCTTATTCTGGAGTAATATTGCTACAGATAGCAGAAAGAATTAAACAAAATGGTGGATTTGCTTTGATAGCCGATTACGGTCACAATGGTGAAAAAACAGATACTCTTAGGGGCTTTAAGAACCACAAATTACATGATGTCTTGTGTGATCCTGGAACAGCTGATATGACAGCAGATGTTGATTTCTCTTTCTTTAGACATCTTTGTTTATCAACAAAAGCAATTTCACCATATGGTCCAGTTACACAAAGAGAATTTCTACAGAATATGGGAATATATCTCCGGTTACATATGCTCCTGAGAAAAGAGAAAGACGAGACAGTAAAGAAGAATTTATTATCAGGTTACGATATGATAACCAACCCAGAGAAGATGGGAGAAAGATTTAAATTCTTTGCTATGTTGCAAAAGAAGAAGGATGACAGTTATATACCTGAGGGATTTAAACCTTTGCCAATCAAATAAAGTGAATATGTTTCTTCTGTATCTGGATAAGTATGTTGTAGATACCAATACTGGCTTAAAAACAACAAAAAAGAGTGCCGTCGACATTTTGACGCTGTGTGAGAGCAGATTTGTAGTATACTGTATTGCTGTTTGTATACATGTATGACTGAGCAGAAATATACTGTGTGGACAAAAATATTGGAACGATAAATAATGTCATGTTTCGTCACCTTCATGTAAGCGCTCTGTCTTTCATCTGATTGCACGTTTAAGATGATGTAAAAGAAAAAAAACTTAATTATATACGAAATATGCAAATAGAATTGACTTGCCGTAATGAAATATGCAAATAGAATTGACTTGCCGTAATATCTGGTGAAATAACTCTGAGCTCAACTTTGCAAATCTGTTTTGGAATTAACAAGTACACATCTGAATATAATTTTGATGCATATTTGGGAAAAAAAATTGCATTTCCAATAAATTTCGGTCTCTGAGCCGATTAATCCATGATTTTTATGTAGTTTTAGATTTTTCTTATTCAAACTCTAAACACATGCTCATTGTTGTCCTGAAAATAATAATCATCAGCTACAATGTGGTGCCAAACAATGACTGGTCATAAACGATTGTCATAGCAATGACTGGTAACATGCAGTTGTCGTTGCAATGACTGGCCACAAACAATTGTCATAGCTCAAATTTTAACAGCAGCTACATGGCAATGAGTAGTTTAACATATATTCTGAGTTTTTCTGTGAGATTTTTTCAGCCAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02636	Methyltransf_28	Putative S-adenosyl-L-methionine-dependent methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003788	Family	Protein arginine methyltransferase NDUFAF7	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR038375	Homologous_superfamily	Protein arginine methyltransferase NDUFAF7 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12049	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0032981	Biological Process	mitochondrial respiratory chain complex I assembly	Interproscan
GO:0035243	Molecular Function	protein-arginine omega-N symmetric methyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18164	NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7	-	Thermogenesis	ko04714	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_40569-13.16 global RNA-seq network