| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_40566-0.3 | NEURON-DERIVED NEUROTROPHIC FACTOR | Bpl_scaf_40566 | 2447 | 3651 | - |
| CDS | |||||
| Bpl_scaf_40566-0.3 | |||||
| Transcript |
| Bpl_scaf_40566-0.3 |
| Protein |
| Bpl_scaf_40566-0.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01413 | C4 | C-terminal tandem repeated domain in type 4 procollagen | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001442 | Domain | Collagen IV, non-collagenous | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR019326 | Family | Protein NDNF | Interproscan |
| IPR036954 | Homologous_superfamily | Collagen IV, non-collagenous domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14619 | NEURON-DERIVED NEUROTROPHIC FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005201 | Molecular Function | extracellular matrix structural constituent | Interproscan |
| GO:0005581 | Cellular Component | collagen trimer | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06237 | COL4A; collagen, type IV, alpha | - | PI3K-Akt signaling pathway | ko04151 | PMID: 28812709 |
| ECM-receptor interaction | ko04512 | PMID: 28812709 | |||
| Focal adhesion | ko04510 | PMID: 28812709 | |||
| Protein digestion and absorption | ko04974 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Small cell lung cancer | ko05222 | PMID: 28812709 | |||
| AGE-RAGE signaling pathway in diabetic complications | ko04933 | PMID: 28812709 | |||
| Human papillomavirus infection | ko05165 | PMID: 28812709 | |||
| Amoebiasis | ko05146 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_40566-0.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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