| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_40417-2.14 | MYD88 | Bpl_scaf_40417 | 255959 | 261395 | - |
| CDS | |||||
| Bpl_scaf_40417-2.14 | |||||
| Transcript |
| Bpl_scaf_40417-2.14 |
| Protein |
| Bpl_scaf_40417-2.14 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13676 | TIR_2 | TIR domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000157 | Domain | Toll/interleukin-1 receptor homology (TIR) domain | Interproscan |
| IPR017281 | Family | Myeloid differentiation primary response protein MyD88 | Interproscan |
| IPR035897 | Homologous_superfamily | Toll/interleukin-1 receptor homology (TIR) domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15079 | MYD88 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002755 | Biological Process | MyD88-dependent toll-like receptor signaling pathway | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
| GO:0043123 | Biological Process | positive regulation of canonical NF-kappaB signal transduction | Interproscan |
| GO:0070976 | Molecular Function | TIR domain binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04729 | MYD88; myeloid differentiation primary response protein MyD88 | - | NF-kappa B signaling pathway | ko04064 | PMID: 28812709 |
| Toll-like receptor signaling pathway | ko04620 | PMID: 28812709 | |||
| Toll and Imd signaling pathway | ko04624 | PMID: 28812709 | |||
| NOD-like receptor signaling pathway | ko04621 | PMID: 28812709 | |||
| Salmonella infection | ko05132 | PMID: 28812709 | |||
| Pertussis | ko05133 | PMID: 28812709 | |||
| Legionellosis | ko05134 | PMID: 28812709 | |||
| Tuberculosis | ko05152 | PMID: 28812709 | |||
| Measles | ko05162 | PMID: 28812709 | |||
| Influenza A | ko05164 | PMID: 28812709 | |||
| Hepatitis B | ko05161 | PMID: 28812709 | |||
| Herpes simplex infection | ko05168 | PMID: 28812709 | |||
| Malaria | ko05144 | PMID: 28812709 | |||
| Toxoplasmosis | ko05145 | PMID: 28812709 | |||
| Leishmaniasis | ko05140 | PMID: 28812709 | |||
| Chagas disease (American trypanosomiasis) | ko05142 | PMID: 28812709 | |||
| African trypanosomiasis | ko05143 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_40417-2.14 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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