| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_39475-6.10 | 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE | Bpl_scaf_39475 | 652079 | 675109 | + |
| CDS | |||||
| Bpl_scaf_39475-6.10 | |||||
| Transcript |
| Bpl_scaf_39475-6.10 |
| Protein |
| Bpl_scaf_39475-6.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01154 | HMG_CoA_synt_N | Hydroxymethylglutaryl-coenzyme A synthase N terminal | Domain | Interproscan |
| PF08540 | HMG_CoA_synt_C | Hydroxymethylglutaryl-coenzyme A synthase C terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000590 | Active_site | Hydroxymethylglutaryl-coenzyme A synthase, active site | Interproscan |
| IPR010122 | Family | Hydroxymethylglutaryl-CoA synthase, eukaryotic | Interproscan |
| IPR013528 | Domain | Hydroxymethylglutaryl-coenzyme A synthase, N-terminal | Interproscan |
| IPR013746 | Domain | Hydroxymethylglutaryl-coenzyme A synthase, C-terminal domain | Interproscan |
| IPR016039 | Homologous_superfamily | Thiolase-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43323 | 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004421 | Molecular Function | hydroxymethylglutaryl-CoA synthase activity | Interproscan |
| GO:0006084 | Biological Process | acetyl-CoA metabolic process | Interproscan |
| GO:0008299 | Biological Process | isoprenoid biosynthetic process | Interproscan |
| GO:0010142 | Biological Process | farnesyl diphosphate biosynthetic process, mevalonate pathway | Interproscan |
| GO:0016746 | Molecular Function | acyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01641 | E2.3.3.10; hydroxymethylglutaryl-CoA synthase | EC:2.3.3.10 | Butanoate metabolism | ko00650 | PMID: 28812709 |
| Synthesis and degradation of ketone bodies | ko00072 | PMID: 28812709 | |||
| Valine, leucine and isoleucine degradation | ko00280 | PMID: 28812709 | |||
| Terpenoid backbone biosynthesis | ko00900 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_39475-6.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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