| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_38784-0.3 | CCR4 NOT-RELATED | Bpl_scaf_38784 | 12062 | 43847 | - |
| CDS | |||||
| Bpl_scaf_38784-0.3 | |||||
| Transcript |
| Bpl_scaf_38784-0.3 |
| Protein |
| Bpl_scaf_38784-0.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04153 | NOT2_3_5_C | NOT2/NOT3/NOT5 C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007282 | Domain | NOT2/NOT3/NOT5, C-terminal | Interproscan |
| IPR038635 | Homologous_superfamily | CCR4-NOT complex subunit 2/3/5, C-terminal domain superfamily | Interproscan |
| IPR040168 | Family | Not2/Not3/Not5 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23326 | CCR4 NOT-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000289 | Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | Interproscan |
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0030015 | Cellular Component | CCR4-NOT core complex | Interproscan |
| GO:2000036 | Biological Process | regulation of stem cell population maintenance | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12605 | CNOT2, NOT2; CCR4-NOT transcription complex subunit 2 | - | RNA degradation | ko03018 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_38784-0.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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