Gene detail

Detailed information of Bpl_scaf_38703-12.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_38703-12.10	MASTERMIND-LIKE	Bpl_scaf_38703	1238741	1249377	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_38703-12.10

ATGGGGGATTTCTCCTCCCCCAAACGGCGGGATGTTTTTGATCGATTAAGGAGACGTATTGAATTATACAGGCGACACCAAAATAAAACCTCGGCGAGGTATGACAACACTATAAATAGTTTGTACGAGAGGGAAGGACAAGATTCTTTATTGTTACGTGAACGGTGGCTGCAGAGTAAAGCGAAGAAAGCTTCGAAGTCGAAAAAGGAGAACAGTTCTGGAGAACATAGAAATATTGGTCTAACGAAGTTGCTTAAGAAAAAGATCGATAACAATCAGACCGAGACACCCAACCTTGACACTAGTGCTTTTGATTTTGATGAGGCGGATACGATCACAACTCAAAAAACTGTTAAAAGTGGGTCCGGTGTTGACGTCTCCGTTCGTATTGTACAAGAAATCACGGGAGGTAACTCGCAACAAGTACAGACAAACGTAGCAGTCAGTACGACTGTCAAAACACACATCGGATCGGTTACGGACGATAATACATCGACTAGTGTTGAAACGAGTACAAAATTTGAATGTAAACAAGAGCCATGTGATGATATTCAATGCGTAAAGTCAAACAAATCAGACATCAGCCATACTGGCTCTTCTGAAATTCTTGACCAAGAAGAACTTGAAGAAATTTTGAAAACGATTGAAAAAGATGAAGGAAAGTTGAGTGACGAGATTTTTGAAGAACTACAAAAATTTGACCAAATTTATAGTAAAGTGTCCCAAGAGGATAGTAATGACTCAAGTATGTTCGGAAGCATGACTGGAAGTTCCCCAGGCTTGCATAAACAGCCTCCATATGACCCCGGAAATACCGGGAGTTCGGGGAACATGTTTGAAAATGCACAAGCAAACCCCGTTAGAACTCCTCCTGTTCCGTTTAGACCCTCTGGTGCAATTACCACAATGACTGAAACGGGACCAGCGGCGGAGACGTTGAAACAAATGGCAGCACAACACCAAAGTAACCAGCATCACGGAGGCACGTTCGGGGTTAAACAATTTAATTCACACGTACAAGACGGCAATTATCCTGGTTATCCGGCCCCGACCATTGATCAGTCGTATTCACACCAGCAAGGATACATTAATCAACAAAATATGAACAATATACAAAATGGTTCACTCTATCACGAAGGGAACCCAGATATATATGCGGGGACAAAGCCCCTGACTCACTACACGGGGTCAGCTGGTAATAATACCCCATCATCTCTCCAACAACTTCAAAATCAGGTCCAGTCGTTTAGTCAGAGTCCGCAAATGGAAATTACTCAAACTCAACAAATGCAGGTGAGTGATGGGTCGCGACGGATGCAGATGTCTCAGACCCAACAAATGCACATGAGACAACCCATACAAAATATATCCCTGTCTCAACATCAGTCTTTTACGATGCCCAATAATATGACACCTTCTCCAGGATACATGACTGAACAGATGAAAATGCAGCAGATGTATCAGGAAAAGATGAGGCAGGAACAACACCACCAAAGCATGCAAGCTGCTCAGATGCAGCAGTTTATGAGACCACCTCCGGAATATAAGATGCAACAATCAGCACCCGAGGGTTACCCAACAAACGCTAGCCGGCAAAATCCTTTACAATCAGCACCCGAGGGTTACCCAACAAACGCCAGCAGGCAAAACCCATTACAAACAATGCAAGATATGGTGGAACAAACGAATAGTATGCAAGCGTCCGGTTACGGTAATGTAAAATCAGAAAGTCCTACTTCACATATTCAGAATGGTATGATGCAGTCCGCTCAAATGGCCGCAATGCAGCGTGGAACAGTAAGCTCAACGATCAACTCTGGTTCAATTATGTCTCAAAATGATCCGAATCAAGCTGGATACCATATTTCGCATATTCAACGACAACAGTCGTATCCTGGTGCCCATATGGACACCTCTTTAGTACGTCCAACTCGACAAGCCGGAAACAATTATACCAGTACGATTATGCGCAATCAGAGGCCACCGAATGTGAACGTTGGACCGGAAGGTTTGAATATTTCACAGCCTCGCAGTCAAGAATGGCCTCGGCACATGATGACACAACATGGCAGTATGAACGGAATGCCCAGGCCTCAAAATCAGAACATTTTGTATAGTAATTCGTATGCTACTCAAGGAGGGACTACTGTTGCCAATGGCATGGGAATGAATCAAACAAGGCCCATGCAGATGACGGCAATGCAATCGCAAGCAGCCATGATGCAAAACAATGCACAGGCGCAACACATGTTGATGCAACAACAGAGCATGCATATGTCACAGAGAATGGCAATGCCCAATCATATAACGGGACAAAGTAATTCAAATTTTAATCCTCGTCCTCCCCAGCAAGACGATTTTATGAATATACTGGATAGTGCTTCTCAGAGTGGTAATTCTGATTACATAGACAATATGGCGGCTCAAAGTACCGGTGTCAGTAGTGACGCCGCTTGGTTAGATGAAATTTTAAGTGGAAAATGA

Transcript

Bpl_scaf_38703-12.10

CAATGAATGGACCAGTCCAAAATTGGAAAGCGTGCCGTGAAAATATCAATCTGAATAGCTTAAGTATTTTGTACAGTACATTGCTACTGTGTCGAGGGGGATAAAAATATTGTACATATTCTAAGTGTACATTTGTAACAGTCAGACGCTATGTGTATTGGTGTGCAAATCATAAATACTGTGGAATAGATCTGGGACGTAAACAAAGCGATCAATGGCTTTCTGATTATAAAATGTTACTTGTTAAAGGTCGGATGTGATTTCTAATACGGGACACTGTTGTCTCGTAGAGACTGTAACATACATGCATGCAATATTATGGGGGATTTCTCCTCCCCCAAACGGCGGGATGTTTTTGATCGATTAAGGAGACGTATTGAATTATACAGGCGACACCAAAATAAAACCTCGGCGAGGTATGACAACACTATAAATAGTTTGTACGAGAGGGAAGGACAAGATTCTTTATTGTTACGTGAACGGTGGCTGCAGAGTAAAGCGAAGAAAGCTTCGAAGTCGAAAAAGGAGAACAGTTCTGGAGAACATAGAAATATTGGTCTAACGAAGTTGCTTAAGAAAAAGATCGATAACAATCAGACCGAGACACCCAACCTTGACACTAGTGCTTTTGATTTTGATGAGGCGGATACGATCACAACTCAAAAAACTGTTAAAAGTGGGTCCGGTGTTGACGTCTCCGTTCGTATTGTACAAGAAATCACGGGAGGTAACTCGCAACAAGTACAGACAAACGTAGCAGTCAGTACGACTGTCAAAACACACATCGGATCGGTTACGGACGATAATACATCGACTAGTGTTGAAACGAGTACAAAATTTGAATGTAAACAAGAGCCATGTGATGATATTCAATGCGTAAAGTCAAACAAATCAGACATCAGCCATACTGGCTCTTCTGAAATTCTTGACCAAGAAGAACTTGAAGAAATTTTGAAAACGATTGAAAAAGATGAAGGAAAGTTGAGTGACGAGATTTTTGAAGAACTACAAAAATTTGACCAAATTTATAGTAAAGTGTCCCAAGAGGATAGTAATGACTCAAGTATGTTCGGAAGCATGACTGGAAGTTCCCCAGGCTTGCATAAACAGCCTCCATATGACCCCGGAAATACCGGGAGTTCGGGGAACATGTTTGAAAATGCACAAGCAAACCCCGTTAGAACTCCTCCTGTTCCGTTTAGACCCTCTGGTGCAATTACCACAATGACTGAAACGGGACCAGCGGCGGAGACGTTGAAACAAATGGCAGCACAACACCAAAGTAACCAGCATCACGGAGGCACGTTCGGGGTTAAACAATTTAATTCACACGTACAAGACGGCAATTATCCTGGTTATCCGGCCCCGACCATTGATCAGTCGTATTCACACCAGCAAGGATACATTAATCAACAAAATATGAACAATATACAAAATGGTTCACTCTATCACGAAGGGAACCCAGATATATATGCGGGGACAAAGCCCCTGACTCACTACACGGGGTCAGCTGGTAATAATACCCCATCATCTCTCCAACAACTTCAAAATCAGGTCCAGTCGTTTAGTCAGAGTCCGCAAATGGAAATTACTCAAACTCAACAAATGCAGGTGAGTGATGGGTCGCGACGGATGCAGATGTCTCAGACCCAACAAATGCACATGAGACAACCCATACAAAATATATCCCTGTCTCAACATCAGTCTTTTACGATGCCCAATAATATGACACCTTCTCCAGGATACATGACTGAACAGATGAAAATGCAGCAGATGTATCAGGAAAAGATGAGGCAGGAACAACACCACCAAAGCATGCAAGCTGCTCAGATGCAGCAGTTTATGAGACCACCTCCGGAATATAAGATGCAACAATCAGCACCCGAGGGTTACCCAACAAACGCTAGCCGGCAAAATCCTTTACAATCAGCACCCGAGGGTTACCCAACAAACGCCAGCAGGCAAAACCCATTACAAACAATGCAAGATATGGTGGAACAAACGAATAGTATGCAAGCGTCCGGTTACGGTAATGTAAAATCAGAAAGTCCTACTTCACATATTCAGAATGGTATGATGCAGTCCGCTCAAATGGCCGCAATGCAGCGTGGAACAGTAAGCTCAACGATCAACTCTGGTTCAATTATGTCTCAAAATGATCCGAATCAAGCTGGATACCATATTTCGCATATTCAACGACAACAGTCGTATCCTGGTGCCCATATGGACACCTCTTTAGTACGTCCAACTCGACAAGCCGGAAACAATTATACCAGTACGATTATGCGCAATCAGAGGCCACCGAATGTGAACGTTGGACCGGAAGGTTTGAATATTTCACAGCCTCGCAGTCAAGAATGGCCTCGGCACATGATGACACAACATGGCAGTATGAACGGAATGCCCAGGCCTCAAAATCAGAACATTTTGTATAGTAATTCGTATGCTACTCAAGGAGGGACTACTGTTGCCAATGGCATGGGAATGAATCAAACAAGGCCCATGCAGATGACGGCAATGCAATCGCAAGCAGCCATGATGCAAAACAATGCACAGGCGCAACACATGTTGATGCAACAACAGAGCATGCATATGTCACAGAGAATGGCAATGCCCAATCATATAACGGGACAAAGTAATTCAAATTTTAATCCTCGTCCTCCCCAGCAAGACGATTTTATGAATATACTGGATAGTGCTTCTCAGAGTGGTAATTCTGATTACATAGACAATATGGCGGCTCAAAGTACCGGTGTCAGTAGTGACGCCGCTTGGTTAGATGAAATTTTAAGTGGAAAATGAAACTTTCCTTTCAATAGAAGATAGTTTACCGTTACATGCAATTTTTGTTAAATTGTTTTTTTTTTTTTTAAATATTGTTTTACATACCGTTTTGTGTGGTGGTTCATGTGTAACAAGAAAAGTTTTTATTGAATGATGAAGTTGCTACTTAGAAACCGGACACTACCTCGATAGACAAGAAAATCTTTGTGTAAAGTTGTACAAAGATAAGTTTCGTGTTTCTTCTATTATCACAAGAATGTTGATTCAGGGAAATTAAAATCAAATGGATTGTAGAAAACTTGATTAAAGAGAGTGCCGACTCTGGTCTACGTTGGTATACGACCGATATTTAATTTGTAATTGTACTTCTATTTGATAATAGGTTGATAGTAGGAATACAGCATAATTTTGTAAAACTTAAAAAAAATTATGACTTTGAAAGGATAAGAACTGTGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09596	MamL-1	MamL-1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019082	Domain	Neurogenic mastermind-like, N-terminal	Interproscan
IPR046369	Family	Mastermind-like 1-3	Interproscan
IPR046370	Homologous_superfamily	Neurogenic mastermind-like, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15692	MASTERMIND-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0007219	Biological Process	Notch signaling pathway	Interproscan
GO:0007221	Biological Process	positive regulation of transcription of Notch receptor target	Interproscan
GO:0016607	Cellular Component	nuclear speck	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06061	MAML; mastermind	-	Notch signaling pathway	ko04330	PMID: 28812709
			Th1 and Th2 cell differentiation	ko04658	PMID: 28812709
			Human papillomavirus infection	ko05165	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_38703-12.10 global RNA-seq network