Gene detail

Detailed information of Bpl_scaf_38703-11.6 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_38703-11.6	PHOSPHOGLYCERATE KINASE	Bpl_scaf_38703	1119445	1136914	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_38703-11.6

CAGGAAAATAGAGTTGTCTCCCCTGAAGTCCGTACAAGGTGATCATCATTGTTCATGTTTATCATTTAGACAGTTGGTCTAAGAACGACTAAAACAGTTAACAATACAATGGCACTCAATAAACTGGCCATAGATTCTTTAGATCTGAAAGATAAACGAGTTTTAATGAGAGTTGACTTCAATGTTCCATTAAAAGATGGGAAAATTACCAACACCCAAAGAATCACTGCTGCTGTACCTACCATCAAGTACGCTTTGGACAATGGAGCTAAATCTGTTGTTTTGATGAGTCACCTTGGTCGACCAGATGGTAGACGTCAAGATAAATATTCAATGTTACCTGTTAAAGAGGAATTAGTTAAACTTTTAGGTCGAGACGTTACATTTCTAACAGACTGTGTTGGAGCAGAGGTGGAAGCAGCATGTGCTAACCCTGCTACAGGGACAGTTTTATTACTGGAGAATCTCAGATTTCATATTGAAGAAGAAGGGAAGGGAGTTGATGCAGAAGGGAAAAAGATCAAATCTGAGAAAGCAGCGGTAGATGAATTCAGAGCCTCTTTATCAAAGTTGGGTGATGTTTATGTTAATGATGCCTTTGGTACAGCACACAGAGCTCATAGTTCAATGGTTGGGTGTCAGCTTTCCCAGAGGGCATCAGGCTTCTTGCTGAAAAAAGAATTATCCTATTTTGCCAAGGCATTAGTTAATCCAGAAAGACCATTCCTGGCTATTCTAGGAGGAGCCAAAGTAGCAGATAAAATCCAGCTGATTGAAAATATGTTGGACAAAGTGAATGAAATGATAATTGGAGGAGGGATGGCTTTTACATTCCTAAAAGTCCTCAATAATATGGAGATTGGAGCTTCTTTATATGATGAAGAAGGGTCAAAGATTGTACAGAAGCTTGTGGAGAAAGCTAAAGCTAACAATGTAACTATTACATTACCAGTAGATATTGTAACAGGGGACAAGTTTGCTGAAAATGCTACCGTAGGAAATGCCACTGTAGAATCTGGTATCCCTGCTGGAAGTATGGGACTGGACATTGGTGAAAAATCAATATCACAATTTACAGAGGTGATTGGTAGAGCTAAAACTATAGTTTGGAATGGGCCTCCAGGTGTATTTGAATTTGCTAATTTTAGTAAAGGTACAAAAGCCATGATGGATGCTGTTGTCAAGGCAACAGAACAAGGAGCTACAACAATTATTGGTGGAGGAGATACAGCAACATGTGCAGCTAAATATAACACAGAAGATAAAGTCAGCCATGTTAGTACTGGAGGTGGAGCCAGTTTAGAATTGTTAGAAGGTAAAAGTCTTCCAGGAGTGGCAGCTCTCTCTGACGCAGCATAATAATTGTCTATCCTGACAAGTAGAGAAAGAATCTTTGTCTGGACTGATGATAAGGGAATTAATGTTAACTCCTTGTCCTTAACTGTTGTTATTTGTAGGTACAAATATTGACACAGTAAATATTTCCATTTCTTTTTAAATTTCGGAATAGAATTTGGACCTGCCTAGATATTAGTTAGACATTTGAGTCGATCACGTTTATAATTAACAATTTAGTGGAACCTGAAATTTTTTAAATTGGCATAACTTAAACTTGTTTGGTAATAACTTTTCAATCTTGTCATGTGTACATGTTAATATTTATACAATATTTTGTATTCTCATTCTTTATACCAATGTGTTACCATGGTTTTAAAGAATAAATTGTCTTGGTGCATGAAACCTCCATTCTAAATAGAACTGAACAAAATTTGAGCAAAGTTTGTTTTTGTTTGTTTGGGTTTTTTATCCAAATTTAAATATTTCGAAATCAACAATGAACATTTATTTTCAATTATTCCAACAAGTTTCAACTCTTGAATTTAATTTGAAATTTCTTTATACTAGTTTAACATCGTGAAATTAAAGTTTTCTTAATTTTAGAATGAAGTAATATTTTGTTCTGTTGTGGACAAACACTATAACACATGGTTCTGAAACTCTTGAATAAACTATACAGTCAAGTGTCTGATACAGTTTAAATATTTCATTAAGTTAACACAGCTTTTCATACCCCTACCTCCCACCCCCAATAATAACAATAAAATTTGTTCACGCCATGATATTGCTAAAATACTGCTAAAGTTGGCGTTAAGCACCACTCTAGCAATCAATTACCCCCCTAAAAGCATATTATAGCAAGAACTAGGAACATTTTTCTCCCATTCAAACTAGGTACAATCACTTACTGTACATCAAGGTATTAATAATGACAGTCCATTTTAAATACAATGTAGTTGAAGATTGGTGCATAAAGCCATTGGGCATATATTTGTTTTTTTTAATGTCTGTTTTTTTGTTTTTTTTTATTTACTGTAATGTTATTAGCTGAGCTTAATCAATAAATATGCTTGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00162	PGK	Phosphoglycerate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001576	Family	Phosphoglycerate kinase	Interproscan
IPR015824	Homologous_superfamily	Phosphoglycerate kinase, N-terminal	Interproscan
IPR015911	Conserved_site	Phosphoglycerate kinase, conserved site	Interproscan
IPR036043	Homologous_superfamily	Phosphoglycerate kinase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11406	PHOSPHOGLYCERATE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004618	Molecular Function	phosphoglycerate kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006094	Biological Process	gluconeogenesis	Interproscan
GO:0006096	Biological Process	glycolytic process	Interproscan
GO:0043531	Molecular Function	ADP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00927	PGK, pgk; phosphoglycerate kinase	EC:2.7.2.3	Carbon metabolism	ko01200	PMID: 28812709
			Biosynthesis of amino acids	ko01230	PMID: 28812709
			Glycolysis / Gluconeogenesis	ko00010	PMID: 28812709
			Carbon fixation in photosynthetic organisms	ko00710	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_38703-11.6 global RNA-seq network