Detailed information of Bpl_scaf_38390-4.5 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_38390-4.5MEIOTIC RECOMBINATION PROTEIN SPO11Bpl_scaf_38390484803496805+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04406TP6A_NType IIB DNA topoisomeraseDomainInterproscan
PF21180TOP6A-Spo11_ToprimTopoisomerase 6 subunit A/Spo11, Toprim domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002815FamilySpo11/DNA topoisomerase VI subunit AInterproscan
IPR013049DomainSpo11/DNA topoisomerase VI, subunit A, N-terminalInterproscan
IPR034136DomainTopoisomerase 6 subunit A/Spo11, TOPRIM domainInterproscan
IPR036078Homologous_superfamilySpo11/DNA topoisomerase VI subunit A superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10848MEIOTIC RECOMBINATION PROTEIN SPO11Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000228Cellular Componentnuclear chromosomeInterproscan
GO:0000706Biological Processmeiotic DNA double-strand break processingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003918Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0042138Biological Processmeiotic DNA double-strand break formationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10878SPO11; meiotic recombination protein SPO11-Meiosis - yeast ko04113PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_38390-4.5 global RNA-seq network
TOP