| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_38338-8.4 | LIM DOMAIN ONLY 7 | Bpl_scaf_38338 | 781886 | 829592 | + |
| CDS | |||||
| Bpl_scaf_38338-8.4 | |||||
| Transcript |
| Bpl_scaf_38338-8.4 |
| Protein |
| Bpl_scaf_38338-8.4 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00412 | LIM | LIM domain | Domain | Interproscan |
| PF00595 | PDZ | PDZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001478 | Domain | PDZ domain | Interproscan |
| IPR001781 | Domain | Zinc finger, LIM-type | Interproscan |
| IPR036034 | Homologous_superfamily | PDZ superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15551 | LIM DOMAIN ONLY 7 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001725 | Cellular Component | stress fiber | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0032034 | Molecular Function | myosin II head/neck binding | Interproscan |
| GO:0051496 | Biological Process | positive regulation of stress fiber assembly | Interproscan |
| GO:0051893 | Biological Process | regulation of focal adhesion assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06084 | LMO7, FBXO20; F-box protein 20 | - | Adherens junction | ko04520 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_38338-8.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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